RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TAOK3Q9H2K8 898 aa21.16■□□□□ 0.98
SND1-203ENST00000463020 ARFGEF2Q9Y6D5 1785 aa21.15■□□□□ 0.98
SND1-203ENST00000463020 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
SND1-203ENST00000463020 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
SND1-203ENST00000463020 MKRN1Q9UHC7 482 aaKnown RBP21.15■□□□□ 0.98
SND1-203ENST00000463020 DPY19L2Q6NUT2 758 aa21.14■□□□□ 0.97
SND1-203ENST00000463020 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
SND1-203ENST00000463020 C7orf43Q8WVR3 580 aa21.14■□□□□ 0.97
SND1-203ENST00000463020 SETDB2Q96T68 719 aa21.14■□□□□ 0.97
SND1-203ENST00000463020 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
SND1-203ENST00000463020 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
SND1-203ENST00000463020 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
SND1-203ENST00000463020 STYK1Q6J9G0 422 aa21.13■□□□□ 0.97
SND1-203ENST00000463020 CHADLQ6NUI6 762 aa21.13■□□□□ 0.97
SND1-203ENST00000463020 TEX13AQ9BXU3 409 aaPredicted RBP21.13■□□□□ 0.97
SND1-203ENST00000463020 BTBD11A6QL63 1104 aa21.12■□□□□ 0.97
SND1-203ENST00000463020 ZNF541Q9H0D2 1346 aa21.11■□□□□ 0.97
SND1-203ENST00000463020 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
SND1-203ENST00000463020 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
SND1-203ENST00000463020 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
SND1-203ENST00000463020 CNKSR1Q969H4 720 aa21.11■□□□□ 0.97
SND1-203ENST00000463020 PDZRN3Q9UPQ7 1066 aa21.11■□□□□ 0.97
SND1-203ENST00000463020 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
SND1-203ENST00000463020 ST5P78524 1137 aa21.1■□□□□ 0.97
SND1-203ENST00000463020 MCM10Q7L590 875 aa21.1■□□□□ 0.97
SND1-203ENST00000463020 SLC51AQ86UW1 340 aa21.1■□□□□ 0.97
SND1-203ENST00000463020 MASTLQ96GX5 879 aa21.1■□□□□ 0.97
SND1-203ENST00000463020 CREBZFQ9NS37 354 aa21.1■□□□□ 0.97
SND1-203ENST00000463020 PASKQ96RG2 1323 aa21.09■□□□□ 0.97
SND1-203ENST00000463020 DCTN1Q14203 1278 aa21.09■□□□□ 0.97
SND1-203ENST00000463020 NPHP1O15259 732 aa21.08■□□□□ 0.97
SND1-203ENST00000463020 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
SND1-203ENST00000463020 NBPF5PQ86XG9 351 aaPredicted RBP21.07■□□□□ 0.96
SND1-203ENST00000463020 TAF1DQ9H5J8 278 aaPredicted RBP21.07■□□□□ 0.96
SND1-203ENST00000463020 KLRG2A4D1S0 409 aaPredicted RBP21.06■□□□□ 0.96
SND1-203ENST00000463020 FAM177BA6PVY3 158 aa21.06■□□□□ 0.96
SND1-203ENST00000463020 FOXN1O15353 648 aa21.06■□□□□ 0.96
SND1-203ENST00000463020 HLFQ16534 295 aa21.06■□□□□ 0.96
SND1-203ENST00000463020 L3MBTL3Q96JM7 780 aaPredicted RBP21.06■□□□□ 0.96
SND1-203ENST00000463020 CNTNAP1P78357 1384 aa21.06■□□□□ 0.96
SND1-203ENST00000463020 COL4A5P29400 1685 aa21.05■□□□□ 0.96
SND1-203ENST00000463020 ADAMTSL1Q8N6G6 1762 aa21.05■□□□□ 0.96
SND1-203ENST00000463020 SNED1Q8TER0 1413 aa21.05■□□□□ 0.96
SND1-203ENST00000463020 ITGBL1O95965 494 aaPredicted RBP21.04■□□□□ 0.96
SND1-203ENST00000463020 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
SND1-203ENST00000463020 ABCC12Q96J65 1359 aa21.03■□□□□ 0.96
SND1-203ENST00000463020 NPR1P16066 1061 aa21.03■□□□□ 0.96
SND1-203ENST00000463020 FKBP4Q02790 459 aaKnown RBP eCLIP21.03■□□□□ 0.96
SND1-203ENST00000463020 CLEC4GQ6UXB4 293 aa21.03■□□□□ 0.96
SND1-203ENST00000463020 LDHDQ86WU2 507 aa21.03■□□□□ 0.96
SND1-203ENST00000463020 MIS18AQ9NYP9 233 aa21.03■□□□□ 0.96
SND1-203ENST00000463020 NIP7Q9Y221 180 aaKnown RBP eCLIP21.03■□□□□ 0.96
SND1-203ENST00000463020 SCN4AP35499 1836 aa21.02■□□□□ 0.96
SND1-203ENST00000463020 SNRPA1P09661 255 aaKnown RBP21.02■□□□□ 0.96
SND1-203ENST00000463020 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
SND1-203ENST00000463020 VEGFBP49765 207 aa21.01■□□□□ 0.95
SND1-203ENST00000463020 EAPPQ56P03 285 aaPredicted RBP21.01■□□□□ 0.95
SND1-203ENST00000463020 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
SND1-203ENST00000463020 RNF123Q5XPI4 1314 aa21■□□□□ 0.95
SND1-203ENST00000463020 LTBP1Q14766 1721 aa20.99■□□□□ 0.95
SND1-203ENST00000463020 IQCA1LA6NCM1 817 aa20.99■□□□□ 0.95
SND1-203ENST00000463020 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
SND1-203ENST00000463020 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
SND1-203ENST00000463020 PPP2R1AP30153 589 aa20.98■□□□□ 0.95
SND1-203ENST00000463020 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
SND1-203ENST00000463020 ZNF652Q9Y2D9 606 aa20.98■□□□□ 0.95
SND1-203ENST00000463020 FZD9O00144 591 aa20.97■□□□□ 0.95
SND1-203ENST00000463020 EPHX2P34913 555 aa20.97■□□□□ 0.95
SND1-203ENST00000463020 IARSP41252 1262 aaKnown RBP20.97■□□□□ 0.95
SND1-203ENST00000463020 FMR1Q06787 632 aaKnown RBP eCLIP20.97■□□□□ 0.955e-14■■■□□ 16.2
SND1-203ENST00000463020 MAP1SQ66K74 1059 aaPredicted RBP20.97■□□□□ 0.95
SND1-203ENST00000463020 TPTE2Q6XPS3 522 aa20.97■□□□□ 0.95
SND1-203ENST00000463020 SYNE4Q8N205 404 aa20.97■□□□□ 0.95
SND1-203ENST00000463020 HACL1Q9UJ83 578 aa20.97■□□□□ 0.95
SND1-203ENST00000463020 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
SND1-203ENST00000463020 TMEM88BA6NKF7 163 aa20.96■□□□□ 0.95
SND1-203ENST00000463020 NGEFQ8N5V2 710 aa20.96■□□□□ 0.95
SND1-203ENST00000463020 RTF1Q92541 710 aaKnown RBP20.95■□□□□ 0.94
SND1-203ENST00000463020 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
SND1-203ENST00000463020 CRY2Q49AN0 593 aa20.94■□□□□ 0.94
SND1-203ENST00000463020 TTLL7Q6ZT98 887 aa20.94■□□□□ 0.94
SND1-203ENST00000463020 C3orf67Q6ZVT6 689 aa20.94■□□□□ 0.94
SND1-203ENST00000463020 RTKN2Q8IZC4 609 aa20.94■□□□□ 0.94
SND1-203ENST00000463020 CLEC11AQ9Y240 323 aa20.94■□□□□ 0.94
SND1-203ENST00000463020 UBN2Q6ZU65 1347 aa20.94■□□□□ 0.94
SND1-203ENST00000463020 KDM3BQ7LBC6 1761 aa20.93■□□□□ 0.94
SND1-203ENST00000463020 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
SND1-203ENST00000463020 CNTROBQ8N137 903 aa20.92■□□□□ 0.94
SND1-203ENST00000463020 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
SND1-203ENST00000463020 WBP1LQ9NX94 342 aa20.92■□□□□ 0.94
SND1-203ENST00000463020 RGL2O15211 777 aa20.91■□□□□ 0.94
SND1-203ENST00000463020 GPTP24298 496 aa20.91■□□□□ 0.94
SND1-203ENST00000463020 LBX1P52954 281 aa20.91■□□□□ 0.94
SND1-203ENST00000463020 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
SND1-203ENST00000463020 NUP98P52948 1817 aa20.9■□□□□ 0.94
SND1-203ENST00000463020 RASSF10A6NK89 507 aa20.9■□□□□ 0.94
SND1-203ENST00000463020 GPC2Q8N158 579 aa20.9■□□□□ 0.94
SND1-203ENST00000463020 PSMD1Q99460 953 aa20.9■□□□□ 0.94
SND1-203ENST00000463020 PRDM10Q9NQV6 1147 aa20.9■□□□□ 0.94
SND1-203ENST00000463020 DLG5Q8TDM6 1919 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms