RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 NBPF15Q8N660 670 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 GPR152Q8TDT2 470 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 CSRNP1Q96S65 589 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 TANGO6Q9C0B7 1094 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 PHACTR1Q9C0D0 580 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 CCSER2Q9H7U1 834 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 CAPN10Q9HC96 672 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.83□□□□□ -1.48
GPNMB-205ENST00000463011 METTL5Q9NRN9 209 aaKnown RBP5.83□□□□□ -1.48
GPNMB-205ENST00000463011 MEN1O00255 615 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 GNA15P30679 374 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 CLN3Q13286 438 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 ORC1Q13415 861 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 C8orf34Q49A92 452 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 KDF1Q8NAX2 398 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-205ENST00000463011 CFHR5Q9BXR6 569 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 FHDC1Q9C0D6 1143 aaPredicted RBP5.82□□□□□ -1.48
GPNMB-205ENST00000463011 TGIF2Q9GZN2 237 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 ACBD3Q9H3P7 528 aa5.82□□□□□ -1.48
GPNMB-205ENST00000463011 A6NHS1 94 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 EIF1AYO14602 144 aaKnown RBP5.81□□□□□ -1.48
GPNMB-205ENST00000463011 RGS20O76081 388 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 PCSK2P16519 638 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 HIRAP54198 1017 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-205ENST00000463011 TREML1Q86YW5 311 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 TTC16Q8NEE8 873 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 NUDT16Q96DE0 195 aaKnown RBP5.81□□□□□ -1.48
GPNMB-205ENST00000463011 MRGPRX2Q96LB1 330 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 AGBL1Q96MI9 1066 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 NLRP3Q96P20 1036 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 TINF2Q9BSI4 451 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 GGNBP2Q9H3C7 697 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 PRKAG2Q9UGJ0 569 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.81□□□□□ -1.48
GPNMB-205ENST00000463011 AK5Q9Y6K8 562 aa5.81□□□□□ -1.48
GPNMB-205ENST00000463011 WNT7AO00755 349 aa5.8□□□□□ -1.48
GPNMB-205ENST00000463011 ITGBL1O95965 494 aaPredicted RBP5.8□□□□□ -1.48
GPNMB-205ENST00000463011 PTGIRP43119 386 aa5.8□□□□□ -1.48
GPNMB-205ENST00000463011 TNNI2P48788 182 aa5.8□□□□□ -1.48
GPNMB-205ENST00000463011 PPARGC1BQ86YN6 1023 aaKnown RBP5.8□□□□□ -1.48
GPNMB-205ENST00000463011 ZNF295-AS1Q8N0V1 137 aa5.8□□□□□ -1.48
GPNMB-205ENST00000463011 ZSCAN10Q96SZ4 725 aaPredicted RBP5.8□□□□□ -1.48
GPNMB-205ENST00000463011 NIFKQ9BYG3 293 aaKnown RBP5.8□□□□□ -1.48
GPNMB-205ENST00000463011 ALDH1A1P00352 501 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 CTSHP09668 335 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 TXLNAP40222 546 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 RELBQ01201 579 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 NNTQ13423 1086 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 TMEM214Q6NUQ4 689 aaKnown RBP5.79□□□□□ -1.48
GPNMB-205ENST00000463011 Q6ZNB5 142 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 DPH6Q7L8W6 267 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 SLC43A3Q8NBI5 491 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 FBF1Q8TES7 1133 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 DHX38Q92620 1227 aaKnown RBP5.79□□□□□ -1.48
GPNMB-205ENST00000463011 EMID1Q96A84 441 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-205ENST00000463011 SPATA32Q96LK8 384 aa5.79□□□□□ -1.48
GPNMB-205ENST00000463011 DNAJC2Q99543 621 aaKnown RBP5.79□□□□□ -1.48
GPNMB-205ENST00000463011 OPLAHO14841 1288 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 NEFLP07196 543 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 ATP2B1P20020 1258 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 C1orf53Q5VUE5 145 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 FRMD6Q96NE9 622 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 ZNF395Q9H8N7 513 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-205ENST00000463011 SPG7Q9UQ90 795 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 BCS1LQ9Y276 419 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 WASF2Q9Y6W5 498 aa5.78□□□□□ -1.48
GPNMB-205ENST00000463011 CPNE3O75131 537 aaKnown RBP5.77□□□□□ -1.49
GPNMB-205ENST00000463011 MICAL2O94851 1124 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 EIF4BP23588 611 aaKnown RBP5.77□□□□□ -1.49
GPNMB-205ENST00000463011 GTF2E1P29083 439 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-205ENST00000463011 GTF2F1P35269 517 aaKnown RBP eCLIP5.77□□□□□ -1.49
GPNMB-205ENST00000463011 GNL2Q13823 731 aaKnown RBP5.77□□□□□ -1.49
GPNMB-205ENST00000463011 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.77□□□□□ -1.49
GPNMB-205ENST00000463011 ZNF394Q53GI3 561 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 Q6ZVU0 165 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 AIDAQ96BJ3 306 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 ITPKCQ96DU7 683 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 CRELD1Q96HD1 420 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 DNAJC25Q9H1X3 360 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 FAM13BQ9NYF5 915 aa5.77□□□□□ -1.49
GPNMB-205ENST00000463011 ZIC2O95409 532 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-205ENST00000463011 CDK11BP21127 795 aaKnown RBP5.76□□□□□ -1.49
GPNMB-205ENST00000463011 DNAJA1P31689 397 aaKnown RBP5.76□□□□□ -1.49
GPNMB-205ENST00000463011 SLC19A1P41440 591 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 PLA2G4AP47712 749 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 USPL1Q5W0Q7 1092 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 GIMAP6Q6P9H5 292 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 PI16Q6UXB8 463 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 RHPN1Q8TCX5 695 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 RHBDD1Q8TEB9 315 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 ZFAND3Q9H8U3 227 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 NLRP2Q9NX02 1062 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 CDK11AQ9UQ88 783 aaPredicted RBP5.76□□□□□ -1.49
GPNMB-205ENST00000463011 INPP5FQ9Y2H2 1132 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 PCDHGB7Q9Y5F8 929 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 CADPSQ9ULU8 1353 aa5.76□□□□□ -1.49
GPNMB-205ENST00000463011 RPLP1P05386 114 aaKnown RBP5.75□□□□□ -1.49
GPNMB-205ENST00000463011 CANXP27824 592 aaKnown RBP5.75□□□□□ -1.49
GPNMB-205ENST00000463011 WDR4P57081 412 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms