RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 RFC4P35249 363 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 KLRG1Q96E93 195 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 NMRK2Q9NPI5 230 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 CLSPNQ9HAW4 1339 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 SBF1O95248 1867 aa11□□□□□ -0.65
GARNL3-212ENST00000463005 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
GARNL3-212ENST00000463005 JMYQ8N9B5 988 aa11□□□□□ -0.65
GARNL3-212ENST00000463005 PIM2Q9P1W9 311 aa11□□□□□ -0.65
GARNL3-212ENST00000463005 KDM2BQ8NHM5 1336 aa11□□□□□ -0.65
GARNL3-212ENST00000463005 C4AP0C0L4 1744 aa11□□□□□ -0.65
GARNL3-212ENST00000463005 ANKRD26Q9UPS8 1709 aa11□□□□□ -0.65
GARNL3-212ENST00000463005 GYS1P13807 737 aa10.99□□□□□ -0.65
GARNL3-212ENST00000463005 KCNA3P22001 575 aa10.99□□□□□ -0.65
GARNL3-212ENST00000463005 C9orf131Q5VYM1 1079 aa10.99□□□□□ -0.65
GARNL3-212ENST00000463005 CARD14Q9BXL6 1004 aa10.99□□□□□ -0.65
GARNL3-212ENST00000463005 METRNQ9UJH8 293 aa10.99□□□□□ -0.65
GARNL3-212ENST00000463005 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
GARNL3-212ENST00000463005 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
GARNL3-212ENST00000463005 COL5A3P25940 1745 aaPredicted RBP10.98□□□□□ -0.65
GARNL3-212ENST00000463005 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
GARNL3-212ENST00000463005 SLC24A3Q9HC58 644 aa10.98□□□□□ -0.65
GARNL3-212ENST00000463005 DALRD3Q5D0E6 543 aaKnown RBP10.97□□□□□ -0.65
GARNL3-212ENST00000463005 SLC4A9Q96Q91 983 aa10.97□□□□□ -0.65
GARNL3-212ENST00000463005 POLKQ9UBT6 870 aa10.97□□□□□ -0.65
GARNL3-212ENST00000463005 KDRP35968 1356 aa10.97□□□□□ -0.65
GARNL3-212ENST00000463005 AMOTQ4VCS5 1084 aa10.96□□□□□ -0.65
GARNL3-212ENST00000463005 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-212ENST00000463005 SLC39A7Q92504 469 aa10.96□□□□□ -0.65
GARNL3-212ENST00000463005 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-212ENST00000463005 RRAGCQ9HB90 399 aa10.96□□□□□ -0.65
GARNL3-212ENST00000463005 TNRC6CQ9HCJ0 1690 aaKnown RBP10.95□□□□□ -0.66
GARNL3-212ENST00000463005 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
GARNL3-212ENST00000463005 ZEB1P37275 1124 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-212ENST00000463005 CABP4P57796 275 aa10.95□□□□□ -0.66
GARNL3-212ENST00000463005 PDIA6Q15084 440 aa10.95□□□□□ -0.66
GARNL3-212ENST00000463005 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-212ENST00000463005 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
GARNL3-212ENST00000463005 RNF181Q9P0P0 153 aa10.95□□□□□ -0.66
GARNL3-212ENST00000463005 CCDC88AQ3V6T2 1871 aa10.94□□□□□ -0.66
GARNL3-212ENST00000463005 EIF4A2Q14240 407 aaKnown RBP10.94□□□□□ -0.66
GARNL3-212ENST00000463005 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
GARNL3-212ENST00000463005 TM4SF1P30408 202 aa10.93□□□□□ -0.66
GARNL3-212ENST00000463005 MTHFSP49914 203 aa10.93□□□□□ -0.66
GARNL3-212ENST00000463005 PRELPP51888 382 aa10.93□□□□□ -0.66
GARNL3-212ENST00000463005 HTRA3P83110 453 aa10.93□□□□□ -0.66
GARNL3-212ENST00000463005 SMYD5Q6GMV2 418 aa10.93□□□□□ -0.66
GARNL3-212ENST00000463005 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
GARNL3-212ENST00000463005 USP42Q9H9J4 1324 aaKnown RBP10.92□□□□□ -0.66
GARNL3-212ENST00000463005 VEGFAP15692 232 aaPredicted RBP10.92□□□□□ -0.66
GARNL3-212ENST00000463005 CRKLP46109 303 aaKnown RBP10.92□□□□□ -0.66
GARNL3-212ENST00000463005 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
GARNL3-212ENST00000463005 C7P10643 843 aa10.91□□□□□ -0.66
GARNL3-212ENST00000463005 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
GARNL3-212ENST00000463005 C1orf141Q5JVX7 400 aa10.91□□□□□ -0.66
GARNL3-212ENST00000463005 ZNF530Q6P9A1 599 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-212ENST00000463005 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
GARNL3-212ENST00000463005 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-212ENST00000463005 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.66
GARNL3-212ENST00000463005 GLTPD2A6NH11 291 aa10.9□□□□□ -0.66
GARNL3-212ENST00000463005 POLRMTO00411 1230 aaKnown RBP10.9□□□□□ -0.66
GARNL3-212ENST00000463005 ZPR1O75312 459 aa10.9□□□□□ -0.66
GARNL3-212ENST00000463005 LMNB1P20700 586 aa10.9□□□□□ -0.66
GARNL3-212ENST00000463005 CHRNA5P30532 468 aa10.9□□□□□ -0.66
GARNL3-212ENST00000463005 DDR1Q08345 913 aa10.9□□□□□ -0.66
GARNL3-212ENST00000463005 SRP68Q9UHB9 627 aaKnown RBP10.9□□□□□ -0.66
GARNL3-212ENST00000463005 AFDNP55196 1824 aaKnown RBP10.9□□□□□ -0.66
GARNL3-212ENST00000463005 ZMYND10O75800 440 aa10.89□□□□□ -0.67
GARNL3-212ENST00000463005 INTS5Q6P9B9 1019 aaKnown RBP10.89□□□□□ -0.67
GARNL3-212ENST00000463005 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
GARNL3-212ENST00000463005 SCN11AQ9UI33 1791 aa10.89□□□□□ -0.67
GARNL3-212ENST00000463005 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-212ENST00000463005 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-212ENST00000463005 TNNT2P45379 298 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-212ENST00000463005 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-212ENST00000463005 TJP1Q07157 1748 aa10.88□□□□□ -0.67
GARNL3-212ENST00000463005 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
GARNL3-212ENST00000463005 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
GARNL3-212ENST00000463005 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
GARNL3-212ENST00000463005 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
GARNL3-212ENST00000463005 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
GARNL3-212ENST00000463005 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
GARNL3-212ENST00000463005 ADAMTS7Q9UKP4 1686 aa10.87□□□□□ -0.67
GARNL3-212ENST00000463005 DLEC1Q9Y238 1755 aa10.87□□□□□ -0.67
GARNL3-212ENST00000463005 NRXN2Q9P2S2 1712 aa10.87□□□□□ -0.67
GARNL3-212ENST00000463005 SERPINB2P05120 415 aa10.86□□□□□ -0.67
GARNL3-212ENST00000463005 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
GARNL3-212ENST00000463005 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
GARNL3-212ENST00000463005 C3orf67Q6ZVT6 689 aa10.86□□□□□ -0.67
GARNL3-212ENST00000463005 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
GARNL3-212ENST00000463005 DDX12PQ92771 950 aa10.86□□□□□ -0.67
GARNL3-212ENST00000463005 VIRMAQ69YN4 1812 aaKnown RBP10.86□□□□□ -0.67
GARNL3-212ENST00000463005 SOS1Q07889 1333 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-212ENST00000463005 H0YIN7 160 aa10.85□□□□□ -0.67
GARNL3-212ENST00000463005 RASSF7Q02833 373 aa10.85□□□□□ -0.67
GARNL3-212ENST00000463005 NFIXQ14938 502 aa10.85□□□□□ -0.67
GARNL3-212ENST00000463005 AKAP4Q5JQC9 854 aa10.85□□□□□ -0.67
GARNL3-212ENST00000463005 DNAJC10Q8IXB1 793 aa10.85□□□□□ -0.67
GARNL3-212ENST00000463005 CYP19A1P11511 503 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-212ENST00000463005 SULT6B1Q6IMI4 303 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms