RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 AFDNP55196 1824 aaKnown RBP20.57■□□□□ 0.88
ERCC3-206ENST00000462306 PXDNLA1KZ92 1463 aa20.56■□□□□ 0.88
ERCC3-206ENST00000462306 MAP3K15Q6ZN16 1313 aa20.56■□□□□ 0.88
ERCC3-206ENST00000462306 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
ERCC3-206ENST00000462306 ERVV-1B6SEH8 477 aa20.56■□□□□ 0.88
ERCC3-206ENST00000462306 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
ERCC3-206ENST00000462306 DDX21Q9NR30 783 aaKnown RBP eCLIP20.56■□□□□ 0.88
ERCC3-206ENST00000462306 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
ERCC3-206ENST00000462306 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
ERCC3-206ENST00000462306 CHPF2Q9P2E5 772 aa20.55■□□□□ 0.88
ERCC3-206ENST00000462306 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
ERCC3-206ENST00000462306 KIF6Q6ZMV9 814 aa20.54■□□□□ 0.88
ERCC3-206ENST00000462306 TSPYL6Q8N831 410 aa20.54■□□□□ 0.88
ERCC3-206ENST00000462306 ZNF521Q96K83 1311 aa20.53■□□□□ 0.88
ERCC3-206ENST00000462306 A0A0G2JLW4 131 aa20.53■□□□□ 0.88
ERCC3-206ENST00000462306 YBX3P16989 372 aaKnown RBP eCLIP20.53■□□□□ 0.88
ERCC3-206ENST00000462306 GPR162Q16538 588 aa20.53■□□□□ 0.88
ERCC3-206ENST00000462306 ZBTB3Q9H5J0 574 aa20.53■□□□□ 0.88
ERCC3-206ENST00000462306 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
ERCC3-206ENST00000462306 DBF4Q9UBU7 674 aaPredicted RBP20.53■□□□□ 0.88
ERCC3-206ENST00000462306 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
ERCC3-206ENST00000462306 DPEP1P16444 411 aa20.52■□□□□ 0.88
ERCC3-206ENST00000462306 PRR5LQ6MZQ0 368 aa20.52■□□□□ 0.88
ERCC3-206ENST00000462306 COPS6Q7L5N1 327 aa20.52■□□□□ 0.88
ERCC3-206ENST00000462306 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
ERCC3-206ENST00000462306 XAGE3Q8WTP9 111 aa20.52■□□□□ 0.88
ERCC3-206ENST00000462306 N4BP2Q86UW6 1770 aaPredicted RBP20.51■□□□□ 0.87
ERCC3-206ENST00000462306 KCNA3P22001 575 aa20.51■□□□□ 0.87
ERCC3-206ENST00000462306 NIP7Q9Y221 180 aaKnown RBP eCLIP20.51■□□□□ 0.87
ERCC3-206ENST00000462306 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
ERCC3-206ENST00000462306 NUP98P52948 1817 aa20.5■□□□□ 0.87
ERCC3-206ENST00000462306 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
ERCC3-206ENST00000462306 GIGYF2Q6Y7W6 1299 aaKnown RBP20.5■□□□□ 0.87
ERCC3-206ENST00000462306 HYPKQ9NX55 129 aa20.49■□□□□ 0.87
ERCC3-206ENST00000462306 WWC3Q9ULE0 1092 aa20.49■□□□□ 0.87
ERCC3-206ENST00000462306 CHRNA5P30532 468 aa20.48■□□□□ 0.87
ERCC3-206ENST00000462306 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
ERCC3-206ENST00000462306 NBPF5PQ86XG9 351 aaPredicted RBP20.48■□□□□ 0.87
ERCC3-206ENST00000462306 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
ERCC3-206ENST00000462306 CCDC24Q8N4L8 307 aa20.48■□□□□ 0.87
ERCC3-206ENST00000462306 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
ERCC3-206ENST00000462306 GOLGA2Q08379 1002 aa20.47■□□□□ 0.87
ERCC3-206ENST00000462306 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
ERCC3-206ENST00000462306 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
ERCC3-206ENST00000462306 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
ERCC3-206ENST00000462306 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
ERCC3-206ENST00000462306 BRCA1P38398 1863 aaKnown RBP20.46■□□□□ 0.87
ERCC3-206ENST00000462306 ANKRD31Q8N7Z5 1873 aa20.46■□□□□ 0.87
ERCC3-206ENST00000462306 GRIN3BO60391 1043 aa20.46■□□□□ 0.87
ERCC3-206ENST00000462306 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
ERCC3-206ENST00000462306 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
ERCC3-206ENST00000462306 UTRNP46939 3433 aa20.45■□□□□ 0.86
ERCC3-206ENST00000462306 GPTP24298 496 aa20.45■□□□□ 0.86
ERCC3-206ENST00000462306 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
ERCC3-206ENST00000462306 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
ERCC3-206ENST00000462306 PHAXQ9H814 394 aaKnown RBP20.45■□□□□ 0.86
ERCC3-206ENST00000462306 PIM2Q9P1W9 311 aa20.45■□□□□ 0.86
ERCC3-206ENST00000462306 FAM177BA6PVY3 158 aa20.44■□□□□ 0.86
ERCC3-206ENST00000462306 ST5P78524 1137 aa20.44■□□□□ 0.86
ERCC3-206ENST00000462306 ANKRD13DQ6ZTN6 518 aa20.44■□□□□ 0.86
ERCC3-206ENST00000462306 PLBD2Q8NHP8 589 aa20.44■□□□□ 0.86
ERCC3-206ENST00000462306 NPHP1O15259 732 aa20.43■□□□□ 0.86
ERCC3-206ENST00000462306 VAMP4O75379 141 aa20.43■□□□□ 0.86
ERCC3-206ENST00000462306 PDE6BP35913 854 aa20.43■□□□□ 0.86
ERCC3-206ENST00000462306 SUSD4Q5VX71 490 aa20.43■□□□□ 0.86
ERCC3-206ENST00000462306 C2CD5Q86YS7 1000 aa20.43■□□□□ 0.86
ERCC3-206ENST00000462306 BCS1LQ9Y276 419 aa20.43■□□□□ 0.86
ERCC3-206ENST00000462306 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
ERCC3-206ENST00000462306 H0YIN7 160 aa20.42■□□□□ 0.86
ERCC3-206ENST00000462306 TCIRG1Q13488 830 aa20.42■□□□□ 0.86
ERCC3-206ENST00000462306 HSP90AB3PQ58FF7 597 aa20.42■□□□□ 0.86
ERCC3-206ENST00000462306 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
ERCC3-206ENST00000462306 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
ERCC3-206ENST00000462306 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
ERCC3-206ENST00000462306 NTSR2O95665 410 aa20.41■□□□□ 0.86
ERCC3-206ENST00000462306 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
ERCC3-206ENST00000462306 DALRD3Q5D0E6 543 aaKnown RBP20.41■□□□□ 0.86
ERCC3-206ENST00000462306 PDZRN3Q9UPQ7 1066 aa20.41■□□□□ 0.86
ERCC3-206ENST00000462306 KLRG2A4D1S0 409 aaPredicted RBP20.4■□□□□ 0.86
ERCC3-206ENST00000462306 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
ERCC3-206ENST00000462306 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
ERCC3-206ENST00000462306 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
ERCC3-206ENST00000462306 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.86
ERCC3-206ENST00000462306 ABCC12Q96J65 1359 aa20.39■□□□□ 0.85
ERCC3-206ENST00000462306 E9PSI1 815 aa20.39■□□□□ 0.85
ERCC3-206ENST00000462306 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
ERCC3-206ENST00000462306 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
ERCC3-206ENST00000462306 ERFEQ4G0M1 354 aa20.39■□□□□ 0.85
ERCC3-206ENST00000462306 PPP1R42Q7Z4L9 355 aa20.39■□□□□ 0.85
ERCC3-206ENST00000462306 NLRP10Q86W26 655 aa20.39■□□□□ 0.85
ERCC3-206ENST00000462306 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
ERCC3-206ENST00000462306 SRGNP10124 158 aa20.38■□□□□ 0.85
ERCC3-206ENST00000462306 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
ERCC3-206ENST00000462306 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
ERCC3-206ENST00000462306 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
ERCC3-206ENST00000462306 ARFGEF2Q9Y6D5 1785 aa20.37■□□□□ 0.85
ERCC3-206ENST00000462306 G2E3Q7L622 706 aa20.37■□□□□ 0.85
ERCC3-206ENST00000462306 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
ERCC3-206ENST00000462306 TTLL6Q8N841 843 aa20.37■□□□□ 0.85
ERCC3-206ENST00000462306 UTP14AQ9BVJ6 771 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms