RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 LTN1O94822 1766 aa8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 POTECB2RU33 542 aa8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 VEGFBP49765 207 aa8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 TMF1P82094 1093 aa8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 CCDC87Q9NVE4 849 aa8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 BRCA1P38398 1863 aaKnown RBP8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 NSD3Q9BZ95 1437 aa8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 HSPA8P11142 646 aaKnown RBP8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 IP6K1Q92551 441 aa8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 CNTNAP1P78357 1384 aa8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
SMARCC1-204ENST00000462198 GNPATO15228 680 aa8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 PPP1R37O75864 691 aa8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 PARP3Q9Y6F1 533 aa8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 KTN1Q86UP2 1357 aaKnown RBP8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
SMARCC1-204ENST00000462198 USP31Q70CQ4 1352 aa8.28□□□□□ -1.08
SMARCC1-204ENST00000462198 NME9Q86XW9 330 aa8.28□□□□□ -1.08
SMARCC1-204ENST00000462198 ARIH1Q9Y4X5 557 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-204ENST00000462198 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
SMARCC1-204ENST00000462198 VIRMAQ69YN4 1812 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 ROCK2O75116 1388 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 LOC102724428A0A0B4J2F2 783 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 LMNB1P20700 586 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 SIK1P57059 783 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 RASSF7Q02833 373 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 POTEEQ6S8J3 1075 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 PIGBQ92521 554 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 KHSRPQ92945 711 aaKnown RBP eCLIP8.27□□□□□ -1.093e-7■■■□□ 16.1
SMARCC1-204ENST00000462198 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.09
SMARCC1-204ENST00000462198 CHRNA5P30532 468 aa8.26□□□□□ -1.09
SMARCC1-204ENST00000462198 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
SMARCC1-204ENST00000462198 ITGB4P16144 1822 aa8.26□□□□□ -1.09
SMARCC1-204ENST00000462198 TMEM88BA6NKF7 163 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 GYS1P13807 737 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 MAP2K1Q02750 393 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 ITPK1Q13572 414 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 NBPF6Q5VWK0 638 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 SMYD5Q6GMV2 418 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 RAPGEF4Q8WZA2 1011 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 NBPF4Q96M43 638 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 PODXL2Q9NZ53 605 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 RTCBQ9Y3I0 505 aaKnown RBP8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 CGNL1Q0VF96 1302 aa8.25□□□□□ -1.09
SMARCC1-204ENST00000462198 MEGF6O75095 1541 aa8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 C4AP0C0L4 1744 aa8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 TATP17735 454 aaPredicted RBP8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 RFC4P35249 363 aa8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 MFSD10Q14728 455 aa8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 DEFB115Q30KQ5 88 aa8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 PASKQ96RG2 1323 aa8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 MAP2P11137 1827 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 FAM208AQ9UK61 1670 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-204ENST00000462198 KDM6AO15550 1401 aaPredicted RBP8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 CYP27B1O15528 508 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 HOXC9P31274 260 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 AMPHP49418 695 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 USHBP1Q8N6Y0 703 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-204ENST00000462198 RGS20O76081 388 aa8.22□□□□□ -1.09
SMARCC1-204ENST00000462198 FBLN1P23142 703 aa8.22□□□□□ -1.09
SMARCC1-204ENST00000462198 PCDH11XQ9BZA7 1347 aa8.22□□□□□ -1.09
SMARCC1-204ENST00000462198 PCDH11YQ9BZA8 1340 aa8.22□□□□□ -1.09
SMARCC1-204ENST00000462198 CASP8AP2Q9UKL3 1982 aa8.21□□□□□ -1.09
SMARCC1-204ENST00000462198 RASSF10A6NK89 507 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 RPS6KA4O75676 772 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 ITGBL1O95965 494 aaPredicted RBP8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 ADGRD1Q6QNK2 874 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 ZMYND15Q9H091 742 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 SBNO2Q9Y2G9 1366 aa8.21□□□□□ -1.1
SMARCC1-204ENST00000462198 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-204ENST00000462198 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
SMARCC1-204ENST00000462198 RC3H1Q5TC82 1133 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-204ENST00000462198 MAP3K19Q56UN5 1328 aa8.2□□□□□ -1.1
SMARCC1-204ENST00000462198 MON2Q7Z3U7 1717 aa8.2□□□□□ -1.1
SMARCC1-204ENST00000462198 CD163L1Q9NR16 1453 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 NFKBIEO00221 500 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 DDR1Q08345 913 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 LDHDQ86WU2 507 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 TTLL6Q8N841 843 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 CRISPLD2Q9H0B8 497 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 RSPH6AQ9H0K4 717 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
SMARCC1-204ENST00000462198 TMOD3Q9NYL9 352 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms