RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 CHMP5Q9NZZ3 219 aa9.05□□□□□ -0.96
NPHP1-209ENST00000461707 KIF13BQ9NQT8 1826 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 SSFA2P28290 1259 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 HDGFL1Q5TGJ6 251 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 TICAM2Q86XR7 235 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 RPAP1Q9BWH6 1393 aaPredicted RBP9.04□□□□□ -0.96
NPHP1-209ENST00000461707 GCP02774 474 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 ZC3H6P61129 1189 aaKnown RBP9.04□□□□□ -0.96
NPHP1-209ENST00000461707 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 ZGPATQ8N5A5 531 aaKnown RBP9.04□□□□□ -0.96
NPHP1-209ENST00000461707 CABLES1Q8TDN4 633 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 PALD1Q9ULE6 856 aa9.04□□□□□ -0.96
NPHP1-209ENST00000461707 GNAI2P04899 355 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 HSP90AB1P08238 724 aaKnown RBP9.03□□□□□ -0.96
NPHP1-209ENST00000461707 CCDC30Q5VVM6 783 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 LOC285556D6RIA3 1793 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 SPATA31A3Q5VYP0 1347 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 PI4KAP2A4QPH2 592 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 TRAK2O60296 914 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
NPHP1-209ENST00000461707 CCT4P50991 539 aaKnown RBP9.03□□□□□ -0.96
NPHP1-209ENST00000461707 PI4KAP1Q8N8J0 262 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 BRWD3Q6RI45 1802 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
NPHP1-209ENST00000461707 ALDH8A1Q9H2A2 487 aaPredicted RBP9.02□□□□□ -0.96
NPHP1-209ENST00000461707 CHMP4BQ9H444 224 aaKnown RBP9.02□□□□□ -0.96
NPHP1-209ENST00000461707 MED23Q9ULK4 1368 aa9.02□□□□□ -0.97
NPHP1-209ENST00000461707 ANKRD31Q8N7Z5 1873 aa9.02□□□□□ -0.97
NPHP1-209ENST00000461707 K7ELQ4 463 aaPredicted RBP9.02□□□□□ -0.97
NPHP1-209ENST00000461707 ATP8B2P98198 1209 aa9.02□□□□□ -0.97
NPHP1-209ENST00000461707 ZNF530Q6P9A1 599 aaPredicted RBP9.02□□□□□ -0.97
NPHP1-209ENST00000461707 RBBP6Q7Z6E9 1792 aaKnown RBP9.02□□□□□ -0.97
NPHP1-209ENST00000461707 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
NPHP1-209ENST00000461707 CUL4AQ13619 759 aa9.02□□□□□ -0.97
NPHP1-209ENST00000461707 GAS2L3Q86XJ1 694 aa9.02□□□□□ -0.97
NPHP1-209ENST00000461707 SIPA1L1O43166 1804 aa9.01□□□□□ -0.97
NPHP1-209ENST00000461707 XRCC6P12956 609 aaKnown RBP eCLIP9.01□□□□□ -0.97
NPHP1-209ENST00000461707 RFX5P48382 616 aaPredicted RBP9.01□□□□□ -0.97
NPHP1-209ENST00000461707 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
NPHP1-209ENST00000461707 RABL6Q3YEC7 729 aaPredicted RBP9.01□□□□□ -0.97
NPHP1-209ENST00000461707 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
NPHP1-209ENST00000461707 CWF19L2Q2TBE0 894 aaKnown RBP9.01□□□□□ -0.97
NPHP1-209ENST00000461707 ANKRD24Q8TF21 1146 aa9.01□□□□□ -0.97
NPHP1-209ENST00000461707 RILPL2Q969X0 211 aa9.01□□□□□ -0.97
NPHP1-209ENST00000461707 BTBD11A6QL63 1104 aa9□□□□□ -0.97
NPHP1-209ENST00000461707 NOL8Q76FK4 1167 aaKnown RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 JARID2Q92833 1246 aaPredicted RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 ZDHHC9Q9Y397 364 aa9□□□□□ -0.97
NPHP1-209ENST00000461707 COL9A3Q14050 684 aaPredicted RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 AKAP4Q5JQC9 854 aa9□□□□□ -0.97
NPHP1-209ENST00000461707 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 DUOX1Q9NRD9 1551 aa9□□□□□ -0.97
NPHP1-209ENST00000461707 FOXD4L5Q5VV16 416 aaPredicted RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 FOXD4L4Q8WXT5 416 aaPredicted RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 TTC14Q96N46 770 aa9□□□□□ -0.97
NPHP1-209ENST00000461707 LRRCC1Q9C099 1032 aa9□□□□□ -0.97
NPHP1-209ENST00000461707 PA2G4Q9UQ80 394 aaKnown RBP9□□□□□ -0.97
NPHP1-209ENST00000461707 RNMTO43148 476 aaKnown RBP8.99□□□□□ -0.97
NPHP1-209ENST00000461707 MX1P20591 662 aa8.99□□□□□ -0.97
NPHP1-209ENST00000461707 CHRNA2Q15822 529 aa8.99□□□□□ -0.97
NPHP1-209ENST00000461707 KRT28Q7Z3Y7 464 aa8.99□□□□□ -0.97
NPHP1-209ENST00000461707 ATAD5Q96QE3 1844 aa8.99□□□□□ -0.97
NPHP1-209ENST00000461707 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
NPHP1-209ENST00000461707 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
NPHP1-209ENST00000461707 HSP90AA1P07900 732 aaKnown RBP8.98□□□□□ -0.97
NPHP1-209ENST00000461707 PAPPA2Q9BXP8 1791 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 RIC1Q4ADV7 1423 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 SRGAP3O43295 1099 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 CHMLP26374 656 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 AIMP1Q12904 312 aaKnown RBP8.98□□□□□ -0.97
NPHP1-209ENST00000461707 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-209ENST00000461707 HAP1P54257 671 aaPredicted RBP8.98□□□□□ -0.97
NPHP1-209ENST00000461707 FBXL16Q8N461 479 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 KLHDC4Q8TBB5 520 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 NID2Q14112 1375 aa8.98□□□□□ -0.97
NPHP1-209ENST00000461707 ZNF609O15014 1411 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 KDM4FA0A1W2PPD8 638 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 GIGYF1O75420 1035 aaPredicted RBP8.97□□□□□ -0.97
NPHP1-209ENST00000461707 KCNH5Q8NCM2 988 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 ESYT1Q9BSJ8 1104 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 UPF3BQ9BZI7 483 aaKnown RBP8.97□□□□□ -0.97
NPHP1-209ENST00000461707 MAP3K2Q9Y2U5 619 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 HMMRO75330 724 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 GNAI3P08754 354 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 TEFQ10587 303 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 TSGA10IPQ3SY00 556 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 SRCIN1Q9C0H9 1055 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 ERBB4Q15303 1308 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 CCDC88AQ3V6T2 1871 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 ERC2O15083 957 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 ST3GAL1Q11201 340 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 DNAAF4Q8WXU2 420 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 CIZ1Q9ULV3 898 aaPredicted RBP8.97□□□□□ -0.97
NPHP1-209ENST00000461707 ARFGEF1Q9Y6D6 1849 aa8.97□□□□□ -0.97
NPHP1-209ENST00000461707 CPA1P15085 419 aa8.96□□□□□ -0.97
NPHP1-209ENST00000461707 RRAGDQ9NQL2 400 aaPredicted RBP8.96□□□□□ -0.97
NPHP1-209ENST00000461707 NSFL1CQ9UNZ2 370 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms