RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 SHISA8B8ZZ34 492 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 ARAFP10398 606 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 IRS1P35568 1242 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 DPYDQ12882 1025 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 SLCO4C1Q6ZQN7 724 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 STAG2Q8N3U4 1231 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 CHMP3Q9Y3E7 222 aa9.08□□□□□ -0.96
UBA3-204ENST00000461522 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
UBA3-204ENST00000461522 GDF11O95390 407 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 CD33P20138 364 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 LAMC2Q13753 1193 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 LRRC69Q6ZNQ3 347 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 TMEM151AQ8N4L1 468 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 GAS2L2Q8NHY3 880 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 RHPN1Q8TCX5 695 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 GGA1Q9UJY5 639 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 ATAD2Q6PL18 1390 aa9.07□□□□□ -0.96
UBA3-204ENST00000461522 ANKMY2Q8IV38 441 aa9.06□□□□□ -0.96
UBA3-204ENST00000461522 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
UBA3-204ENST00000461522 ARXQ96QS3 562 aa9.06□□□□□ -0.96
UBA3-204ENST00000461522 PHACTR1Q9C0D0 580 aa9.06□□□□□ -0.96
UBA3-204ENST00000461522 STRN4Q9NRL3 753 aa9.06□□□□□ -0.96
UBA3-204ENST00000461522 HCN4Q9Y3Q4 1203 aa9.06□□□□□ -0.96
UBA3-204ENST00000461522 CNTNAP5Q8WYK1 1306 aa9.05□□□□□ -0.96
UBA3-204ENST00000461522 SCG3Q8WXD2 468 aaKnown RBP9.05□□□□□ -0.96
UBA3-204ENST00000461522 C2orf49Q9BVC5 232 aaPredicted RBP9.05□□□□□ -0.96
UBA3-204ENST00000461522 AVENQ9NQS1 362 aaPredicted RBP9.05□□□□□ -0.96
UBA3-204ENST00000461522 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
UBA3-204ENST00000461522 EPXP11678 715 aa9.04□□□□□ -0.96
UBA3-204ENST00000461522 BEND7Q8N7W2 519 aaPredicted RBP9.04□□□□□ -0.96
UBA3-204ENST00000461522 NEUROD4Q9HD90 331 aa9.04□□□□□ -0.96
UBA3-204ENST00000461522 MARK1Q9P0L2 795 aa9.04□□□□□ -0.96
UBA3-204ENST00000461522 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
UBA3-204ENST00000461522 PODNQ7Z5L7 613 aa9.03□□□□□ -0.96
UBA3-204ENST00000461522 KLF15Q9UIH9 416 aa9.03□□□□□ -0.96
UBA3-204ENST00000461522 NEURL1BA8MQ27 555 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 ADH6P28332 368 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 SNRPNP63162 240 aaKnown RBP9.02□□□□□ -0.97
UBA3-204ENST00000461522 ZNF468Q5VIY5 522 aaPredicted RBP9.02□□□□□ -0.97
UBA3-204ENST00000461522 ALDH16A1Q8IZ83 802 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 HSH2DQ96JZ2 352 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 HINFPQ9BQA5 517 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
UBA3-204ENST00000461522 HOXB4P17483 251 aaPredicted RBP9.01□□□□□ -0.97
UBA3-204ENST00000461522 IGFBP4P22692 258 aa9.01□□□□□ -0.97
UBA3-204ENST00000461522 ZNF280CQ8ND82 737 aa9.01□□□□□ -0.97
UBA3-204ENST00000461522 CHMP7Q8WUX9 453 aaPredicted RBP9.01□□□□□ -0.97
UBA3-204ENST00000461522 SUSD3Q96L08 255 aa9.01□□□□□ -0.97
UBA3-204ENST00000461522 ANKIB1Q9P2G1 1089 aa9.01□□□□□ -0.97
UBA3-204ENST00000461522 LGR5O75473 907 aa9□□□□□ -0.97
UBA3-204ENST00000461522 FCHSD1Q86WN1 690 aa9□□□□□ -0.97
UBA3-204ENST00000461522 SFSWAPQ12872 951 aaKnown RBP8.99□□□□□ -0.97
UBA3-204ENST00000461522 GRIN2CQ14957 1233 aa8.99□□□□□ -0.97
UBA3-204ENST00000461522 BTBD6Q96KE9 485 aa8.99□□□□□ -0.97
UBA3-204ENST00000461522 PRR12Q9ULL5 1215 aa8.99□□□□□ -0.97
UBA3-204ENST00000461522 RFX1P22670 979 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 WEE1P30291 646 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 KCNQ4P56696 695 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 PCBP4P57723 403 aaKnown RBP8.98□□□□□ -0.97
UBA3-204ENST00000461522 TYRO3Q06418 890 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 FAM200AQ8TCP9 573 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 MKL2Q9ULH7 1088 aa8.98□□□□□ -0.97
UBA3-204ENST00000461522 AMPD1P23109 780 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 HIF1AQ16665 826 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 RTN1Q16799 776 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 NGLY1Q96IV0 654 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 CEP63Q96MT8 703 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 MDFIQ99750 246 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 RRAGCQ9HB90 399 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 BRD7Q9NPI1 651 aa8.97□□□□□ -0.97
UBA3-204ENST00000461522 DGKGP49619 791 aa8.96□□□□□ -0.98
UBA3-204ENST00000461522 SRPK2P78362 688 aaKnown RBP8.96□□□□□ -0.98
UBA3-204ENST00000461522 LINC00114Q6XXX2 140 aa8.96□□□□□ -0.98
UBA3-204ENST00000461522 SYT9Q86SS6 491 aa8.96□□□□□ -0.98
UBA3-204ENST00000461522 DCAF5Q96JK2 942 aa8.96□□□□□ -0.98
UBA3-204ENST00000461522 SLC30A3Q99726 388 aa8.96□□□□□ -0.98
UBA3-204ENST00000461522 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
UBA3-204ENST00000461522 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
UBA3-204ENST00000461522 ELOAQ14241 798 aaKnown RBP8.95□□□□□ -0.98
UBA3-204ENST00000461522 CHSY3Q70JA7 882 aa8.95□□□□□ -0.98
UBA3-204ENST00000461522 BTLAQ7Z6A9 289 aa8.95□□□□□ -0.98
UBA3-204ENST00000461522 FOXO3O43524 673 aa8.94□□□□□ -0.98
UBA3-204ENST00000461522 SIN3BO75182 1162 aa8.94□□□□□ -0.98
UBA3-204ENST00000461522 SPEM2Q0P670 501 aa8.94□□□□□ -0.98
UBA3-204ENST00000461522 IER5Q5VY09 327 aa8.94□□□□□ -0.98
UBA3-204ENST00000461522 ZMIZ1Q9ULJ6 1067 aa8.94□□□□□ -0.98
UBA3-204ENST00000461522 KCNH4Q9UQ05 1017 aa8.94□□□□□ -0.98
UBA3-204ENST00000461522 ELOA3CA0A087WX78 387 aaPredicted RBP8.93□□□□□ -0.98
UBA3-204ENST00000461522 ELOA3DA6NLF2 546 aaPredicted RBP8.93□□□□□ -0.98
UBA3-204ENST00000461522 ELOA3BQ3SY89 546 aa8.93□□□□□ -0.98
UBA3-204ENST00000461522 ELOA3Q8NG57 546 aa8.93□□□□□ -0.98
UBA3-204ENST00000461522 BCS1LQ9Y276 419 aa8.93□□□□□ -0.98
UBA3-204ENST00000461522 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
UBA3-204ENST00000461522 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.92□□□□□ -0.98
UBA3-204ENST00000461522 ADARB2-AS1A8MUL3 147 aa8.92□□□□□ -0.98
UBA3-204ENST00000461522 TGFBR3LH3BV60 316 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms