RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 ST5P78524 1137 aa17.39■□□□□ 0.37
C9orf78-202ENST00000461349 PNMA8AQ86V59 439 aaPredicted RBP17.39■□□□□ 0.37
C9orf78-202ENST00000461349 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
C9orf78-202ENST00000461349 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
C9orf78-202ENST00000461349 THSD7BQ9C0I4 1608 aa17.39■□□□□ 0.37
C9orf78-202ENST00000461349 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
C9orf78-202ENST00000461349 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
C9orf78-202ENST00000461349 EPHX2P34913 555 aa17.38■□□□□ 0.37
C9orf78-202ENST00000461349 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
C9orf78-202ENST00000461349 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
C9orf78-202ENST00000461349 MASTLQ96GX5 879 aa17.38■□□□□ 0.37
C9orf78-202ENST00000461349 SRGNP10124 158 aa17.37■□□□□ 0.37
C9orf78-202ENST00000461349 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
C9orf78-202ENST00000461349 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
C9orf78-202ENST00000461349 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
C9orf78-202ENST00000461349 RGS19P49795 217 aa17.36■□□□□ 0.37
C9orf78-202ENST00000461349 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
C9orf78-202ENST00000461349 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
C9orf78-202ENST00000461349 MAP1SQ66K74 1059 aaPredicted RBP17.35■□□□□ 0.37
C9orf78-202ENST00000461349 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
C9orf78-202ENST00000461349 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
C9orf78-202ENST00000461349 ECE1P42892 770 aa17.34■□□□□ 0.37
C9orf78-202ENST00000461349 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
C9orf78-202ENST00000461349 CFAP44Q96MT7 982 aa17.34■□□□□ 0.37
C9orf78-202ENST00000461349 TEX13AQ9BXU3 409 aaPredicted RBP17.34■□□□□ 0.37
C9orf78-202ENST00000461349 IL13P35225 146 aa17.33■□□□□ 0.36
C9orf78-202ENST00000461349 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
C9orf78-202ENST00000461349 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
C9orf78-202ENST00000461349 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
C9orf78-202ENST00000461349 SIPA1L3O60292 1781 aaPredicted RBP17.32■□□□□ 0.36
C9orf78-202ENST00000461349 GRM1Q13255 1194 aa17.31■□□□□ 0.36
C9orf78-202ENST00000461349 RTKN2Q8IZC4 609 aa17.31■□□□□ 0.36
C9orf78-202ENST00000461349 GPC2Q8N158 579 aa17.31■□□□□ 0.36
C9orf78-202ENST00000461349 CAPNS2Q96L46 248 aa17.31■□□□□ 0.36
C9orf78-202ENST00000461349 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
C9orf78-202ENST00000461349 HEG1Q9ULI3 1381 aa17.3■□□□□ 0.36
C9orf78-202ENST00000461349 NPR1P16066 1061 aa17.3■□□□□ 0.36
C9orf78-202ENST00000461349 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
C9orf78-202ENST00000461349 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
C9orf78-202ENST00000461349 PANK3Q9H999 370 aa17.3■□□□□ 0.36
C9orf78-202ENST00000461349 CASP8AP2Q9UKL3 1982 aa17.29■□□□□ 0.36
C9orf78-202ENST00000461349 HMOX1P09601 288 aa17.29■□□□□ 0.36
C9orf78-202ENST00000461349 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
C9orf78-202ENST00000461349 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
C9orf78-202ENST00000461349 LTBP1Q14766 1721 aa17.28■□□□□ 0.36
C9orf78-202ENST00000461349 FZD9O00144 591 aa17.28■□□□□ 0.36
C9orf78-202ENST00000461349 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
C9orf78-202ENST00000461349 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
C9orf78-202ENST00000461349 TEFQ10587 303 aa17.28■□□□□ 0.36
C9orf78-202ENST00000461349 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
C9orf78-202ENST00000461349 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
C9orf78-202ENST00000461349 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
C9orf78-202ENST00000461349 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
C9orf78-202ENST00000461349 ZNF790Q6PG37 636 aa17.27■□□□□ 0.36
C9orf78-202ENST00000461349 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.36
C9orf78-202ENST00000461349 ZNF652Q9Y2D9 606 aa17.26■□□□□ 0.35
C9orf78-202ENST00000461349 CA12O43570 354 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 A1BGP04217 495 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 MAP2K2P36507 400 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
C9orf78-202ENST00000461349 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
C9orf78-202ENST00000461349 PDE4DIPQ5VU43 2346 aa17.24■□□□□ 0.35
C9orf78-202ENST00000461349 OLFM4Q6UX06 510 aa17.24■□□□□ 0.35
C9orf78-202ENST00000461349 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
C9orf78-202ENST00000461349 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
C9orf78-202ENST00000461349 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
C9orf78-202ENST00000461349 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
C9orf78-202ENST00000461349 TNRC18O15417 2968 aaPredicted RBP17.23■□□□□ 0.35
C9orf78-202ENST00000461349 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
C9orf78-202ENST00000461349 KLRG2A4D1S0 409 aaPredicted RBP17.22■□□□□ 0.35
C9orf78-202ENST00000461349 PSMD1Q99460 953 aa17.22■□□□□ 0.35
C9orf78-202ENST00000461349 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
C9orf78-202ENST00000461349 AOC2O75106 756 aa17.21■□□□□ 0.35
C9orf78-202ENST00000461349 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.35
C9orf78-202ENST00000461349 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
C9orf78-202ENST00000461349 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
C9orf78-202ENST00000461349 DGKZQ13574 1117 aa17.2■□□□□ 0.34
C9orf78-202ENST00000461349 CST9Q5W186 159 aa17.2■□□□□ 0.34
C9orf78-202ENST00000461349 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf78-202ENST00000461349 TRAF5O00463 557 aa17.19■□□□□ 0.34
C9orf78-202ENST00000461349 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
C9orf78-202ENST00000461349 EPS15P42566 896 aa17.19■□□□□ 0.34
C9orf78-202ENST00000461349 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
C9orf78-202ENST00000461349 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
C9orf78-202ENST00000461349 SCNN1DP51172 638 aa17.18■□□□□ 0.34
C9orf78-202ENST00000461349 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
C9orf78-202ENST00000461349 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
C9orf78-202ENST00000461349 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
C9orf78-202ENST00000461349 COL4A5P29400 1685 aa17.17■□□□□ 0.34
C9orf78-202ENST00000461349 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-202ENST00000461349 SAPCD2Q86UD0 394 aa17.17■□□□□ 0.34
C9orf78-202ENST00000461349 LARGE2Q8N3Y3 721 aa17.17■□□□□ 0.34
C9orf78-202ENST00000461349 SNED1Q8TER0 1413 aa17.16■□□□□ 0.34
C9orf78-202ENST00000461349 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
C9orf78-202ENST00000461349 RGL2O15211 777 aa17.16■□□□□ 0.34
C9orf78-202ENST00000461349 GRIPAP1Q4V328 841 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms