RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PRDM6Q9NQX0 595 aa7.3□□□□□ -1.24
CLK1-206ENST00000461326 ADARB2-AS1A8MUL3 147 aa7.29□□□□□ -1.24
CLK1-206ENST00000461326 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
CLK1-206ENST00000461326 MTFR1Q15390 333 aa7.29□□□□□ -1.24
CLK1-206ENST00000461326 MDFIQ99750 246 aa7.29□□□□□ -1.24
CLK1-206ENST00000461326 NEUROD1Q13562 356 aa7.28□□□□□ -1.24
CLK1-206ENST00000461326 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
CLK1-206ENST00000461326 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
CLK1-206ENST00000461326 NEUROD4Q9HD90 331 aa7.28□□□□□ -1.24
CLK1-206ENST00000461326 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
CLK1-206ENST00000461326 C9orf172C9J069 976 aa7.27□□□□□ -1.25
CLK1-206ENST00000461326 LRP8Q14114 963 aa7.27□□□□□ -1.25
CLK1-206ENST00000461326 PROSER2Q86WR7 435 aaPredicted RBP7.27□□□□□ -1.25
CLK1-206ENST00000461326 PLPP7Q8NBV4 271 aa7.27□□□□□ -1.25
CLK1-206ENST00000461326 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
CLK1-206ENST00000461326 TBC1D2BQ9UPU7 963 aa7.27□□□□□ -1.25
CLK1-206ENST00000461326 TMEM229AB2RXF0 380 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 BACH1O14867 736 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 GRIK4Q16099 956 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 WWC1Q8IX03 1113 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 MICALL1Q8N3F8 863 aa7.26□□□□□ -1.25
CLK1-206ENST00000461326 ALBP02768 609 aa7.25□□□□□ -1.25
CLK1-206ENST00000461326 CLUAP1Q96AJ1 413 aa7.25□□□□□ -1.25
CLK1-206ENST00000461326 GPC6Q9Y625 555 aaPredicted RBP7.25□□□□□ -1.25
CLK1-206ENST00000461326 PARP3Q9Y6F1 533 aa7.25□□□□□ -1.25
CLK1-206ENST00000461326 USP3Q9Y6I4 520 aa7.25□□□□□ -1.25
CLK1-206ENST00000461326 NID1P14543 1247 aa7.24□□□□□ -1.25
CLK1-206ENST00000461326 TXLNAP40222 546 aa7.24□□□□□ -1.25
CLK1-206ENST00000461326 COL9A3Q14050 684 aaPredicted RBP7.24□□□□□ -1.25
CLK1-206ENST00000461326 LRRC69Q6ZNQ3 347 aa7.24□□□□□ -1.25
CLK1-206ENST00000461326 STARD13Q9Y3M8 1113 aa7.24□□□□□ -1.25
CLK1-206ENST00000461326 BTBD11A6QL63 1104 aa7.23□□□□□ -1.25
CLK1-206ENST00000461326 ADH7P40394 386 aa7.23□□□□□ -1.25
CLK1-206ENST00000461326 ADGRE1Q14246 886 aa7.23□□□□□ -1.25
CLK1-206ENST00000461326 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
CLK1-206ENST00000461326 C8orf86Q6ZUL3 223 aa7.23□□□□□ -1.25
CLK1-206ENST00000461326 NRG1Q02297 640 aaPredicted RBP7.22□□□□□ -1.25
CLK1-206ENST00000461326 VAC14Q08AM6 782 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 SPEM2Q0P670 501 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 IRF5Q13568 498 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 MBTPS1Q14703 1052 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 TXNRD3Q86VQ6 643 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 L3MBTL2Q969R5 705 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 COG6Q9Y2V7 657 aa7.22□□□□□ -1.25
CLK1-206ENST00000461326 EML1O00423 815 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 LILRB5O75023 590 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 ELNP15502 786 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 RAC1P63000 192 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 SFSWAPQ12872 951 aaKnown RBP7.21□□□□□ -1.26
CLK1-206ENST00000461326 SEMA3FQ13275 785 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 TEAD4Q15561 434 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
CLK1-206ENST00000461326 SLC30A3Q99726 388 aa7.21□□□□□ -1.26
CLK1-206ENST00000461326 SCHIP1Q9P0W5 487 aaPredicted RBP7.21□□□□□ -1.26
CLK1-206ENST00000461326 HYAL3O43820 417 aaPredicted RBP7.2□□□□□ -1.26
CLK1-206ENST00000461326 NOS2P35228 1153 aa7.2□□□□□ -1.26
CLK1-206ENST00000461326 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
CLK1-206ENST00000461326 EML3Q32P44 896 aa7.2□□□□□ -1.26
CLK1-206ENST00000461326 ZDHHC1Q8WTX9 485 aa7.2□□□□□ -1.26
CLK1-206ENST00000461326 ZNF232Q9UNY5 417 aa7.2□□□□□ -1.26
CLK1-206ENST00000461326 SOX11P35716 441 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 RHPN1Q8TCX5 695 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 TP53INP1Q96A56 240 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 LENG1Q96BZ8 264 aaPredicted RBP7.19□□□□□ -1.26
CLK1-206ENST00000461326 POM121Q96HA1 1249 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 C1orf115Q9H7X2 142 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 PCDHGA11Q9Y5H2 935 aa7.19□□□□□ -1.26
CLK1-206ENST00000461326 A0A0A0MRY4 1105 aa7.18□□□□□ -1.26
CLK1-206ENST00000461326 SELPP16109 830 aa7.18□□□□□ -1.26
CLK1-206ENST00000461326 PSME1Q06323 249 aa7.18□□□□□ -1.26
CLK1-206ENST00000461326 BRD7Q9NPI1 651 aa7.18□□□□□ -1.26
CLK1-206ENST00000461326 ZNF358Q9NW07 568 aa7.18□□□□□ -1.26
CLK1-206ENST00000461326 NOD1Q9Y239 953 aa7.18□□□□□ -1.26
CLK1-206ENST00000461326 SERTM1A2A2V5 107 aa7.17□□□□□ -1.26
CLK1-206ENST00000461326 ARID3CA6NKF2 412 aa7.17□□□□□ -1.26
CLK1-206ENST00000461326 RAB44Q7Z6P3 723 aaPredicted RBP7.17□□□□□ -1.26
CLK1-206ENST00000461326 SLC9A9Q8IVB4 645 aa7.17□□□□□ -1.26
CLK1-206ENST00000461326 GOLGA2P5Q9HBQ8 144 aa7.17□□□□□ -1.26
CLK1-206ENST00000461326 ANKIB1Q9P2G1 1089 aa7.17□□□□□ -1.26
CLK1-206ENST00000461326 LZTS3O60299 673 aaPredicted RBP7.16□□□□□ -1.26
CLK1-206ENST00000461326 GTF2IP78347 998 aa7.16□□□□□ -1.26
CLK1-206ENST00000461326 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLK1-206ENST00000461326 CEP63Q96MT8 703 aa7.16□□□□□ -1.26
CLK1-206ENST00000461326 SERPINA10Q9UK55 444 aa7.16□□□□□ -1.26
CLK1-206ENST00000461326 USP21Q9UK80 565 aa7.16□□□□□ -1.26
CLK1-206ENST00000461326 KCNH4Q9UQ05 1017 aa7.16□□□□□ -1.26
CLK1-206ENST00000461326 CHMP3Q9Y3E7 222 aa7.16□□□□□ -1.26
CLK1-206ENST00000461326 ABL2P42684 1182 aa7.15□□□□□ -1.26
CLK1-206ENST00000461326 KCNQ4P56696 695 aa7.15□□□□□ -1.26
CLK1-206ENST00000461326 CCDC82Q8N4S0 544 aa7.15□□□□□ -1.26
CLK1-206ENST00000461326 CCDC97Q96F63 343 aaPredicted RBP7.15□□□□□ -1.26
CLK1-206ENST00000461326 UBE2OQ9C0C9 1292 aaKnown RBP7.15□□□□□ -1.26
CLK1-206ENST00000461326 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
CLK1-206ENST00000461326 JPH1Q9HDC5 661 aaPredicted RBP7.15□□□□□ -1.26
CLK1-206ENST00000461326 TBC1D8BQ0IIM8 1120 aa7.14□□□□□ -1.27
CLK1-206ENST00000461326 C1orf53Q5VUE5 145 aa7.14□□□□□ -1.27
CLK1-206ENST00000461326 C7orf43Q8WVR3 580 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms