RNA–Protein interactions for RNA: ENST00000461071.1

SLC39A1-208, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 529 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-208ENST00000461071 RGL2O15211 777 aa23.27■■□□□ 1.32
SLC39A1-208ENST00000461071 ERFEQ4G0M1 354 aa23.26■■□□□ 1.31
SLC39A1-208ENST00000461071 SOGA3Q5TF21 947 aa23.26■■□□□ 1.31
SLC39A1-208ENST00000461071 DZIP3Q86Y13 1208 aaKnown RBP23.26■■□□□ 1.31
SLC39A1-208ENST00000461071 TAOK3Q9H2K8 898 aa23.26■■□□□ 1.31
SLC39A1-208ENST00000461071 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
SLC39A1-208ENST00000461071 DLG5Q8TDM6 1919 aa23.25■■□□□ 1.31
SLC39A1-208ENST00000461071 ST5P78524 1137 aa23.25■■□□□ 1.31
SLC39A1-208ENST00000461071 CCDC24Q8N4L8 307 aa23.25■■□□□ 1.31
SLC39A1-208ENST00000461071 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
SLC39A1-208ENST00000461071 COL13A1Q5TAT6 717 aaPredicted RBP23.24■■□□□ 1.31
SLC39A1-208ENST00000461071 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
SLC39A1-208ENST00000461071 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
SLC39A1-208ENST00000461071 LAMB4A4D0S4 1761 aa23.24■■□□□ 1.31
SLC39A1-208ENST00000461071 KLRG2A4D1S0 409 aaPredicted RBP23.23■■□□□ 1.31
SLC39A1-208ENST00000461071 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
SLC39A1-208ENST00000461071 NUP98P52948 1817 aa23.22■■□□□ 1.31
SLC39A1-208ENST00000461071 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
SLC39A1-208ENST00000461071 C7orf43Q8WVR3 580 aa23.22■■□□□ 1.31
SLC39A1-208ENST00000461071 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
SLC39A1-208ENST00000461071 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
SLC39A1-208ENST00000461071 ZNF652Q9Y2D9 606 aa23.21■■□□□ 1.31
SLC39A1-208ENST00000461071 NPHP1O15259 732 aa23.2■■□□□ 1.3
SLC39A1-208ENST00000461071 NBPF5PQ86XG9 351 aaPredicted RBP23.2■■□□□ 1.3
SLC39A1-208ENST00000461071 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
SLC39A1-208ENST00000461071 PRAMEF22A3QJZ6 481 aa23.19■■□□□ 1.3
SLC39A1-208ENST00000461071 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
SLC39A1-208ENST00000461071 MCM10Q7L590 875 aa23.19■■□□□ 1.3
SLC39A1-208ENST00000461071 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 NPR1P16066 1061 aa23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 CHADLQ6NUI6 762 aa23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 KDM3BQ7LBC6 1761 aa23.18■■□□□ 1.3
SLC39A1-208ENST00000461071 PIP4K2AP48426 406 aaPredicted RBP23.17■■□□□ 1.3
SLC39A1-208ENST00000461071 TPTE2Q6XPS3 522 aa23.17■■□□□ 1.3
SLC39A1-208ENST00000461071 L3MBTL3Q96JM7 780 aaPredicted RBP23.17■■□□□ 1.3
SLC39A1-208ENST00000461071 DDNO94850 711 aaPredicted RBP23.16■■□□□ 1.3
SLC39A1-208ENST00000461071 CREBZFQ9NS37 354 aa23.15■■□□□ 1.3
SLC39A1-208ENST00000461071 IQCA1LA6NCM1 817 aa23.14■■□□□ 1.29
SLC39A1-208ENST00000461071 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.29
SLC39A1-208ENST00000461071 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
SLC39A1-208ENST00000461071 NIP7Q9Y221 180 aaKnown RBP eCLIP23.13■■□□□ 1.29
SLC39A1-208ENST00000461071 ADAMTSL1Q8N6G6 1762 aa23.13■■□□□ 1.29
SLC39A1-208ENST00000461071 HSPA1AP0DMV8 641 aaKnown RBP23.12■■□□□ 1.29
SLC39A1-208ENST00000461071 HSPA1BP0DMV9 641 aaKnown RBP23.12■■□□□ 1.29
SLC39A1-208ENST00000461071 FKBP4Q02790 459 aaKnown RBP eCLIP23.12■■□□□ 1.29
SLC39A1-208ENST00000461071 DCTN1Q14203 1278 aa23.12■■□□□ 1.29
SLC39A1-208ENST00000461071 POTEIP0CG38 1075 aa23.11■■□□□ 1.29
SLC39A1-208ENST00000461071 POTEJP0CG39 1038 aa23.11■■□□□ 1.29
SLC39A1-208ENST00000461071 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
SLC39A1-208ENST00000461071 TNS4Q8IZW8 715 aa23.11■■□□□ 1.29
SLC39A1-208ENST00000461071 LDHDQ86WU2 507 aa23.1■■□□□ 1.29
SLC39A1-208ENST00000461071 TAF1DQ9H5J8 278 aaPredicted RBP23.1■■□□□ 1.29
SLC39A1-208ENST00000461071 PASKQ96RG2 1323 aa23.09■■□□□ 1.29
SLC39A1-208ENST00000461071 SNED1Q8TER0 1413 aa23.09■■□□□ 1.29
SLC39A1-208ENST00000461071 ALDH1B1P30837 517 aa23.09■■□□□ 1.29
SLC39A1-208ENST00000461071 HLFQ16534 295 aa23.09■■□□□ 1.29
SLC39A1-208ENST00000461071 CRY2Q49AN0 593 aa23.09■■□□□ 1.29
SLC39A1-208ENST00000461071 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
SLC39A1-208ENST00000461071 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.28
SLC39A1-208ENST00000461071 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
SLC39A1-208ENST00000461071 ITGBL1O95965 494 aaPredicted RBP23.06■■□□□ 1.28
SLC39A1-208ENST00000461071 ZNF277Q9NRM2 450 aaPredicted RBP23.06■■□□□ 1.28
SLC39A1-208ENST00000461071 ZNF541Q9H0D2 1346 aa23.06■■□□□ 1.28
SLC39A1-208ENST00000461071 CNTNAP1P78357 1384 aa23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 IBTKQ9P2D0 1353 aaPredicted RBP23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 FZD9O00144 591 aa23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 OLFM4Q6UX06 510 aa23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 PSMD1Q99460 953 aa23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 NYXQ9GZU5 481 aa23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 MIS18AQ9NYP9 233 aa23.05■■□□□ 1.28
SLC39A1-208ENST00000461071 HOXA10P31260 410 aaPredicted RBP23.04■■□□□ 1.28
SLC39A1-208ENST00000461071 MAP3K15Q6ZN16 1313 aa23.04■■□□□ 1.28
SLC39A1-208ENST00000461071 IARSP41252 1262 aaKnown RBP23.03■■□□□ 1.28
SLC39A1-208ENST00000461071 CC2D2BQ6DHV5 1058 aa23.03■■□□□ 1.28
SLC39A1-208ENST00000461071 PLEKHF1Q96S99 279 aa23.03■■□□□ 1.28
SLC39A1-208ENST00000461071 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
SLC39A1-208ENST00000461071 ABCC12Q96J65 1359 aa23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 FAM177BA6PVY3 158 aa23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 SYNE4Q8N205 404 aa23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 MKRN1Q9UHC7 482 aaKnown RBP23.02■■□□□ 1.28
SLC39A1-208ENST00000461071 NEFMP07197 916 aa23.01■■□□□ 1.27
SLC39A1-208ENST00000461071 PNMA8AQ86V59 439 aaPredicted RBP23.01■■□□□ 1.27
SLC39A1-208ENST00000461071 GPC2Q8N158 579 aa23.01■■□□□ 1.27
SLC39A1-208ENST00000461071 TMEM88BA6NKF7 163 aa23■■□□□ 1.27
SLC39A1-208ENST00000461071 EPHX2P34913 555 aa23■■□□□ 1.27
SLC39A1-208ENST00000461071 TRPM7Q96QT4 1865 aa22.99■■□□□ 1.27
SLC39A1-208ENST00000461071 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
SLC39A1-208ENST00000461071 ERBB4Q15303 1308 aa22.99■■□□□ 1.27
SLC39A1-208ENST00000461071 COL4A5P29400 1685 aa22.99■■□□□ 1.27
SLC39A1-208ENST00000461071 KIF6Q6ZMV9 814 aa22.98■■□□□ 1.27
SLC39A1-208ENST00000461071 TTLL7Q6ZT98 887 aa22.98■■□□□ 1.27
SLC39A1-208ENST00000461071 NUTM1Q86Y26 1132 aa22.98■■□□□ 1.27
SLC39A1-208ENST00000461071 ZNF34Q8IZ26 560 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms