RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 PDIA6Q15084 440 aa13.7□□□□□ -0.22
NEDD9-206ENST00000461055 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
NEDD9-206ENST00000461055 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
NEDD9-206ENST00000461055 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
NEDD9-206ENST00000461055 UPF2Q9HAU5 1272 aaKnown RBP13.7□□□□□ -0.22
NEDD9-206ENST00000461055 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
NEDD9-206ENST00000461055 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
NEDD9-206ENST00000461055 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
NEDD9-206ENST00000461055 SKAP1Q86WV1 359 aa13.69□□□□□ -0.22
NEDD9-206ENST00000461055 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
NEDD9-206ENST00000461055 ADCY9O60503 1353 aa13.69□□□□□ -0.22
NEDD9-206ENST00000461055 SBF2Q86WG5 1849 aa13.69□□□□□ -0.22
NEDD9-206ENST00000461055 TNS2Q63HR2 1409 aa13.68□□□□□ -0.22
NEDD9-206ENST00000461055 RAB11FIP3O75154 756 aa13.68□□□□□ -0.22
NEDD9-206ENST00000461055 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
NEDD9-206ENST00000461055 UTYO14607 1347 aa13.67□□□□□ -0.22
NEDD9-206ENST00000461055 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
NEDD9-206ENST00000461055 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
NEDD9-206ENST00000461055 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
NEDD9-206ENST00000461055 IPO9Q96P70 1041 aaKnown RBP13.67□□□□□ -0.22
NEDD9-206ENST00000461055 MTX1Q13505 466 aa13.66□□□□□ -0.22
NEDD9-206ENST00000461055 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
NEDD9-206ENST00000461055 PLBD2Q8NHP8 589 aa13.66□□□□□ -0.22
NEDD9-206ENST00000461055 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
NEDD9-206ENST00000461055 C9orf78Q9NZ63 289 aaPredicted RBP13.66□□□□□ -0.22
NEDD9-206ENST00000461055 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
NEDD9-206ENST00000461055 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
NEDD9-206ENST00000461055 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 PROSER3Q2NL68 480 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 SYT17Q9BSW7 474 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
NEDD9-206ENST00000461055 STK32BQ9NY57 414 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
NEDD9-206ENST00000461055 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 COL15A1P39059 1388 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 GRM8O00222 908 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 STARD3NLO95772 234 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 POLA2Q14181 598 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 LRP10Q7Z4F1 713 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 POTEDQ86YR6 584 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
NEDD9-206ENST00000461055 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 ANXA1P04083 346 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 KCNQ4P56696 695 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 OSBPL3Q9H4L5 887 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 KAT6BQ8WYB5 2073 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 CASZ1Q86V15 1759 aa13.63□□□□□ -0.23
NEDD9-206ENST00000461055 MYL6BP14649 208 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 AIMP1Q12904 312 aaKnown RBP13.62□□□□□ -0.23
NEDD9-206ENST00000461055 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 PLEKHM2Q8IWE5 1019 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 ZNF784Q8NCA9 323 aaPredicted RBP13.62□□□□□ -0.23
NEDD9-206ENST00000461055 PIGBQ92521 554 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
NEDD9-206ENST00000461055 BCL9O00512 1426 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 C5P01031 1676 aa13.62□□□□□ -0.23
NEDD9-206ENST00000461055 NBPF7P0C2Y1 421 aaPredicted RBP13.61□□□□□ -0.23
NEDD9-206ENST00000461055 GCKRQ14397 625 aa13.61□□□□□ -0.23
NEDD9-206ENST00000461055 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
NEDD9-206ENST00000461055 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
NEDD9-206ENST00000461055 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
NEDD9-206ENST00000461055 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
NEDD9-206ENST00000461055 AOX1Q06278 1338 aa13.61□□□□□ -0.23
NEDD9-206ENST00000461055 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
NEDD9-206ENST00000461055 NEURL1BA8MQ27 555 aa13.6□□□□□ -0.23
NEDD9-206ENST00000461055 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
NEDD9-206ENST00000461055 CASC1Q6TDU7 716 aa13.6□□□□□ -0.23
NEDD9-206ENST00000461055 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
NEDD9-206ENST00000461055 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
NEDD9-206ENST00000461055 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
NEDD9-206ENST00000461055 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
NEDD9-206ENST00000461055 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
NEDD9-206ENST00000461055 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
NEDD9-206ENST00000461055 CDC45O75419 566 aa13.58□□□□□ -0.24
NEDD9-206ENST00000461055 SURF6O75683 361 aaKnown RBP13.58□□□□□ -0.24
NEDD9-206ENST00000461055 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
NEDD9-206ENST00000461055 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
NEDD9-206ENST00000461055 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
NEDD9-206ENST00000461055 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
NEDD9-206ENST00000461055 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
NEDD9-206ENST00000461055 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.24
NEDD9-206ENST00000461055 MYD88Q99836 296 aa13.58□□□□□ -0.24
NEDD9-206ENST00000461055 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
NEDD9-206ENST00000461055 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
NEDD9-206ENST00000461055 TOGARAM1Q9Y4F4 1720 aa13.57□□□□□ -0.24
NEDD9-206ENST00000461055 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
NEDD9-206ENST00000461055 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
NEDD9-206ENST00000461055 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
NEDD9-206ENST00000461055 TBC1D32Q96NH3 1257 aa13.57□□□□□ -0.24
NEDD9-206ENST00000461055 ARXQ96QS3 562 aa13.57□□□□□ -0.24
NEDD9-206ENST00000461055 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
NEDD9-206ENST00000461055 GOLGB1Q14789 3259 aaKnown RBP13.56□□□□□ -0.24
NEDD9-206ENST00000461055 A1BGP04217 495 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms