RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 TWISTNBQ3B726 338 aaPredicted RBP15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 NPM2Q86SE8 214 aaKnown RBP15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 FHDC1Q9C0D6 1143 aaPredicted RBP15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 DBF4Q9UBU7 674 aaPredicted RBP15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 NRXN2Q9P2S2 1712 aa15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
ERGIC3-211ENST00000461043 TBC1D9BQ66K14 1250 aa15.67■□□□□ 0.1
ERGIC3-211ENST00000461043 VAMP4O75379 141 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 HLFQ16534 295 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 SYT17Q9BSW7 474 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 HYPKQ9NX55 129 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 ATP10DQ9P241 1426 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
ERGIC3-211ENST00000461043 CCDC30Q5VVM6 783 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 COPS6Q7L5N1 327 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 XAGE3Q8WTP9 111 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 CD2APQ9Y5K6 639 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 PARP3Q9Y6F1 533 aa15.65■□□□□ 0.1
ERGIC3-211ENST00000461043 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
ERGIC3-211ENST00000461043 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.09
ERGIC3-211ENST00000461043 KIAA1551Q9HCM1 1747 aa15.63■□□□□ 0.09
ERGIC3-211ENST00000461043 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
ERGIC3-211ENST00000461043 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
ERGIC3-211ENST00000461043 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
ERGIC3-211ENST00000461043 NUP98P52948 1817 aa15.62■□□□□ 0.09
ERGIC3-211ENST00000461043 SERPINB2P05120 415 aa15.62■□□□□ 0.09
ERGIC3-211ENST00000461043 NLGN2Q8NFZ4 835 aa15.62■□□□□ 0.09
ERGIC3-211ENST00000461043 PHAXQ9H814 394 aaKnown RBP15.62■□□□□ 0.09
ERGIC3-211ENST00000461043 ZBED9Q6R2W3 1325 aa15.62■□□□□ 0.09
ERGIC3-211ENST00000461043 AIMP1Q12904 312 aaKnown RBP15.61■□□□□ 0.09
ERGIC3-211ENST00000461043 BICDL1Q6ZP65 573 aa15.61■□□□□ 0.09
ERGIC3-211ENST00000461043 ZNF34Q8IZ26 560 aa15.61■□□□□ 0.09
ERGIC3-211ENST00000461043 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
ERGIC3-211ENST00000461043 UBN2Q6ZU65 1347 aa15.61■□□□□ 0.09
ERGIC3-211ENST00000461043 PXDNLA1KZ92 1463 aa15.6■□□□□ 0.09
ERGIC3-211ENST00000461043 ANKRD13DQ6ZTN6 518 aa15.6■□□□□ 0.09
ERGIC3-211ENST00000461043 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
ERGIC3-211ENST00000461043 NIP7Q9Y221 180 aaKnown RBP eCLIP15.6■□□□□ 0.09
ERGIC3-211ENST00000461043 IBTKQ9P2D0 1353 aaPredicted RBP15.6■□□□□ 0.09
ERGIC3-211ENST00000461043 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
ERGIC3-211ENST00000461043 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
ERGIC3-211ENST00000461043 PRR5LQ6MZQ0 368 aa15.59■□□□□ 0.09
ERGIC3-211ENST00000461043 G2E3Q7L622 706 aa15.59■□□□□ 0.09
ERGIC3-211ENST00000461043 STK31Q9BXU1 1019 aa15.59■□□□□ 0.09
ERGIC3-211ENST00000461043 ANKRD36CQ5JPF3 1778 aa15.59■□□□□ 0.09
ERGIC3-211ENST00000461043 ARFGEF2Q9Y6D5 1785 aa15.58■□□□□ 0.08
ERGIC3-211ENST00000461043 KLHL34Q8N239 644 aa15.58■□□□□ 0.08
ERGIC3-211ENST00000461043 TGFB2P61812 414 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 TCIRG1Q13488 830 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 HSP90AB3PQ58FF7 597 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 CNBD1Q8NA66 436 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 ZNF428Q96B54 188 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 ISCA1Q9BUE6 129 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 ADCY9O60503 1353 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 ANKRD31Q8N7Z5 1873 aa15.57■□□□□ 0.08
ERGIC3-211ENST00000461043 CT47B1P0C2W7 299 aaPredicted RBP15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 KCNA3P22001 575 aa15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 GPTP24298 496 aa15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 FLIIQ13045 1269 aa15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 PARP10Q53GL7 1025 aa15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 BRIP1Q9BX63 1249 aa15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
ERGIC3-211ENST00000461043 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
ERGIC3-211ENST00000461043 NTSR2O95665 410 aa15.55■□□□□ 0.08
ERGIC3-211ENST00000461043 TRIM28Q13263 835 aaKnown RBP15.55■□□□□ 0.08
ERGIC3-211ENST00000461043 SUSD4Q5VX71 490 aa15.55■□□□□ 0.08
ERGIC3-211ENST00000461043 NLRP10Q86W26 655 aa15.55■□□□□ 0.08
ERGIC3-211ENST00000461043 ABCC12Q96J65 1359 aa15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 DDX58O95786 925 aaKnown RBP15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 DPEP1P16444 411 aa15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 KSR2Q6VAB6 950 aa15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 TPTE2Q6XPS3 522 aa15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 RIC3Q7Z5B4 369 aa15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 NYXQ9GZU5 481 aa15.54■□□□□ 0.08
ERGIC3-211ENST00000461043 BRCA1P38398 1863 aaKnown RBP15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 RNF123Q5XPI4 1314 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 A0A0G2JLW4 131 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 KLRG2A4D1S0 409 aaPredicted RBP15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 PI4KAP2A4QPH2 592 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 ST5P78524 1137 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 ALDH1L2Q3SY69 923 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 CCDC24Q8N4L8 307 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 MRPL50Q8N5N7 158 aaKnown RBP15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 PI4KAP1Q8N8J0 262 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 SSH1Q8WYL5 1049 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 METTL22Q9BUU2 404 aaPredicted RBP15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 N4BP2Q86UW6 1770 aaPredicted RBP15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 COL11A2P13942 1736 aaPredicted RBP15.53■□□□□ 0.08
ERGIC3-211ENST00000461043 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.08
ERGIC3-211ENST00000461043 ERFEQ4G0M1 354 aa15.52■□□□□ 0.08
ERGIC3-211ENST00000461043 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
ERGIC3-211ENST00000461043 MAP3K2Q9Y2U5 619 aa15.52■□□□□ 0.08
ERGIC3-211ENST00000461043 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms