RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
COL6A2-207ENST00000460886 KCNQ3O43525 872 aa12.47□□□□□ -0.41
COL6A2-207ENST00000460886 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
COL6A2-207ENST00000460886 CLEC4GQ6UXB4 293 aa12.47□□□□□ -0.41
COL6A2-207ENST00000460886 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
COL6A2-207ENST00000460886 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
COL6A2-207ENST00000460886 USP16Q9Y5T5 823 aa12.47□□□□□ -0.41
COL6A2-207ENST00000460886 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
COL6A2-207ENST00000460886 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
COL6A2-207ENST00000460886 JMYQ8N9B5 988 aa12.46□□□□□ -0.41
COL6A2-207ENST00000460886 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
COL6A2-207ENST00000460886 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
COL6A2-207ENST00000460886 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
COL6A2-207ENST00000460886 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
COL6A2-207ENST00000460886 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.42
COL6A2-207ENST00000460886 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
COL6A2-207ENST00000460886 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
COL6A2-207ENST00000460886 SNRPA1P09661 255 aaKnown RBP12.45□□□□□ -0.42
COL6A2-207ENST00000460886 VEGFAP15692 232 aaPredicted RBP12.45□□□□□ -0.42
COL6A2-207ENST00000460886 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
COL6A2-207ENST00000460886 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
COL6A2-207ENST00000460886 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
COL6A2-207ENST00000460886 SMC1BQ8NDV3 1235 aa12.45□□□□□ -0.42
COL6A2-207ENST00000460886 KLRG1Q96E93 195 aa12.45□□□□□ -0.42
COL6A2-207ENST00000460886 KLRG2A4D1S0 409 aaPredicted RBP12.44□□□□□ -0.42
COL6A2-207ENST00000460886 POTECB2RU33 542 aa12.44□□□□□ -0.42
COL6A2-207ENST00000460886 SRGNP10124 158 aa12.44□□□□□ -0.42
COL6A2-207ENST00000460886 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
COL6A2-207ENST00000460886 MCM10Q7L590 875 aa12.44□□□□□ -0.42
COL6A2-207ENST00000460886 PRAMEF22A3QJZ6 481 aa12.43□□□□□ -0.42
COL6A2-207ENST00000460886 TMPOP42166 694 aaKnown RBP12.43□□□□□ -0.42
COL6A2-207ENST00000460886 RIPK4P57078 832 aa12.43□□□□□ -0.42
COL6A2-207ENST00000460886 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
COL6A2-207ENST00000460886 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
COL6A2-207ENST00000460886 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
COL6A2-207ENST00000460886 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
COL6A2-207ENST00000460886 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
COL6A2-207ENST00000460886 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 C21orf2O43822 256 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 ST5P78524 1137 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 SOGA3Q5TF21 947 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
COL6A2-207ENST00000460886 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 C7orf43Q8WVR3 580 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 ZNF622Q969S3 477 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL6A2-207ENST00000460886 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 ZNF652Q9Y2D9 606 aa12.42□□□□□ -0.42
COL6A2-207ENST00000460886 APAF1O14727 1248 aa12.41□□□□□ -0.42
COL6A2-207ENST00000460886 HTRA3P83110 453 aa12.41□□□□□ -0.42
COL6A2-207ENST00000460886 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
COL6A2-207ENST00000460886 DPY19L2Q6NUT2 758 aa12.41□□□□□ -0.42
COL6A2-207ENST00000460886 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
COL6A2-207ENST00000460886 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
COL6A2-207ENST00000460886 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
COL6A2-207ENST00000460886 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
COL6A2-207ENST00000460886 SCN4AP35499 1836 aa12.4□□□□□ -0.42
COL6A2-207ENST00000460886 NUP98P52948 1817 aa12.4□□□□□ -0.42
COL6A2-207ENST00000460886 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
COL6A2-207ENST00000460886 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
COL6A2-207ENST00000460886 MIER1Q8N108 512 aa12.4□□□□□ -0.42
COL6A2-207ENST00000460886 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
COL6A2-207ENST00000460886 SNED1Q8TER0 1413 aa12.39□□□□□ -0.43
COL6A2-207ENST00000460886 CCER2I3L3R5 266 aa12.39□□□□□ -0.43
COL6A2-207ENST00000460886 NPR1P16066 1061 aa12.39□□□□□ -0.43
COL6A2-207ENST00000460886 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
COL6A2-207ENST00000460886 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
COL6A2-207ENST00000460886 TPTE2Q6XPS3 522 aa12.38□□□□□ -0.43
COL6A2-207ENST00000460886 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
COL6A2-207ENST00000460886 NPHP1O15259 732 aa12.37□□□□□ -0.43
COL6A2-207ENST00000460886 CRY2Q49AN0 593 aa12.37□□□□□ -0.43
COL6A2-207ENST00000460886 CCDC93Q567U6 631 aa12.37□□□□□ -0.43
COL6A2-207ENST00000460886 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
COL6A2-207ENST00000460886 MIS18AQ9NYP9 233 aa12.37□□□□□ -0.43
COL6A2-207ENST00000460886 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
COL6A2-207ENST00000460886 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
COL6A2-207ENST00000460886 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL6A2-207ENST00000460886 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
COL6A2-207ENST00000460886 ADAMTSL1Q8N6G6 1762 aa12.36□□□□□ -0.43
COL6A2-207ENST00000460886 EIF4A1P60842 406 aaKnown RBP12.36□□□□□ -0.43
COL6A2-207ENST00000460886 HLFQ16534 295 aa12.36□□□□□ -0.43
COL6A2-207ENST00000460886 FKBP4Q02790 459 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL6A2-207ENST00000460886 ERBB4Q15303 1308 aa12.35□□□□□ -0.43
COL6A2-207ENST00000460886 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
COL6A2-207ENST00000460886 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-207ENST00000460886 ALDH1B1P30837 517 aa12.34□□□□□ -0.43
COL6A2-207ENST00000460886 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
COL6A2-207ENST00000460886 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
COL6A2-207ENST00000460886 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
COL6A2-207ENST00000460886 IQCA1LA6NCM1 817 aa12.33□□□□□ -0.44
COL6A2-207ENST00000460886 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
COL6A2-207ENST00000460886 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
COL6A2-207ENST00000460886 TSPYL4Q9UJ04 414 aa12.33□□□□□ -0.44
COL6A2-207ENST00000460886 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-207ENST00000460886 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
COL6A2-207ENST00000460886 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
COL6A2-207ENST00000460886 FZD9O00144 591 aa12.32□□□□□ -0.44
COL6A2-207ENST00000460886 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
COL6A2-207ENST00000460886 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
COL6A2-207ENST00000460886 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms