RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 UBTFL1P0CB47 393 aaPredicted RBP17.46■□□□□ 0.39
ERCC3-205ENST00000460485 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
ERCC3-205ENST00000460485 PCDH11XQ9BZA7 1347 aa17.46■□□□□ 0.38
ERCC3-205ENST00000460485 PCDH11YQ9BZA8 1340 aa17.46■□□□□ 0.38
ERCC3-205ENST00000460485 SHANK3Q9BYB0 1731 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 CASC1Q6TDU7 716 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 DNAAF4Q8WXU2 420 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 CARD10Q9BWT7 1032 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 AOX1Q06278 1338 aa17.45■□□□□ 0.38
ERCC3-205ENST00000460485 F6X3S4 739 aa17.44■□□□□ 0.38
ERCC3-205ENST00000460485 RBM25P49756 843 aaKnown RBP17.44■□□□□ 0.38
ERCC3-205ENST00000460485 ATP8B2P98198 1209 aa17.44■□□□□ 0.38
ERCC3-205ENST00000460485 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-205ENST00000460485 WNK3Q9BYP7 1800 aa17.44■□□□□ 0.38
ERCC3-205ENST00000460485 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
ERCC3-205ENST00000460485 ERBB4Q15303 1308 aa17.44■□□□□ 0.38
ERCC3-205ENST00000460485 AK9Q5TCS8 1911 aa17.43■□□□□ 0.38
ERCC3-205ENST00000460485 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
ERCC3-205ENST00000460485 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
ERCC3-205ENST00000460485 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
ERCC3-205ENST00000460485 PLEKHM2Q8IWE5 1019 aa17.43■□□□□ 0.38
ERCC3-205ENST00000460485 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
ERCC3-205ENST00000460485 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
ERCC3-205ENST00000460485 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
ERCC3-205ENST00000460485 GRIN3BO60391 1043 aa17.41■□□□□ 0.38
ERCC3-205ENST00000460485 SEC24BO95487 1268 aa17.41■□□□□ 0.38
ERCC3-205ENST00000460485 KSR2Q6VAB6 950 aa17.41■□□□□ 0.38
ERCC3-205ENST00000460485 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
ERCC3-205ENST00000460485 LRRCC1Q9C099 1032 aa17.41■□□□□ 0.38
ERCC3-205ENST00000460485 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
ERCC3-205ENST00000460485 POLD1P28340 1107 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 MTX1Q13505 466 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 TTC5Q8N0Z6 440 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 SSH3Q8TE77 659 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
ERCC3-205ENST00000460485 ADCY9O60503 1353 aa17.4■□□□□ 0.38
ERCC3-205ENST00000460485 ARFGEF2Q9Y6D5 1785 aa17.39■□□□□ 0.37
ERCC3-205ENST00000460485 MFAP1P55081 439 aaKnown RBP17.39■□□□□ 0.37
ERCC3-205ENST00000460485 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
ERCC3-205ENST00000460485 ERVV-2B6SEH9 535 aa17.38■□□□□ 0.37
ERCC3-205ENST00000460485 FMNL2Q96PY5 1086 aa17.38■□□□□ 0.37
ERCC3-205ENST00000460485 PHAXQ9H814 394 aaKnown RBP17.38■□□□□ 0.37
ERCC3-205ENST00000460485 NHSQ6T4R5 1651 aa17.37■□□□□ 0.37
ERCC3-205ENST00000460485 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
ERCC3-205ENST00000460485 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
ERCC3-205ENST00000460485 POLA2Q14181 598 aa17.37■□□□□ 0.37
ERCC3-205ENST00000460485 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
ERCC3-205ENST00000460485 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
ERCC3-205ENST00000460485 NECTIN2Q92692 538 aa17.37■□□□□ 0.37
ERCC3-205ENST00000460485 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
ERCC3-205ENST00000460485 EPB41L2O43491 1005 aaKnown RBP17.36■□□□□ 0.37
ERCC3-205ENST00000460485 NKX1-1Q15270 411 aaPredicted RBP17.36■□□□□ 0.37
ERCC3-205ENST00000460485 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
ERCC3-205ENST00000460485 TBC1D9Q6ZT07 1266 aa17.36■□□□□ 0.37
ERCC3-205ENST00000460485 SNX21Q969T3 373 aa17.36■□□□□ 0.37
ERCC3-205ENST00000460485 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
ERCC3-205ENST00000460485 UTYO14607 1347 aa17.36■□□□□ 0.37
ERCC3-205ENST00000460485 COL15A1P39059 1388 aa17.36■□□□□ 0.37
ERCC3-205ENST00000460485 CYP27B1O15528 508 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 KCNQ3O43525 872 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 IL2RBP14784 551 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 HSPA6P17066 643 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 NEXNQ0ZGT2 675 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 ERC1Q8IUD2 1116 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
ERCC3-205ENST00000460485 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
ERCC3-205ENST00000460485 REC8O95072 547 aa17.34■□□□□ 0.37
ERCC3-205ENST00000460485 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
ERCC3-205ENST00000460485 CABP4P57796 275 aa17.34■□□□□ 0.37
ERCC3-205ENST00000460485 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
ERCC3-205ENST00000460485 SALL3Q9BXA9 1300 aa17.34■□□□□ 0.37
ERCC3-205ENST00000460485 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.37
ERCC3-205ENST00000460485 PDE1AP54750 535 aa17.33■□□□□ 0.36
ERCC3-205ENST00000460485 KIF1BPQ96EK5 621 aa17.33■□□□□ 0.36
ERCC3-205ENST00000460485 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
ERCC3-205ENST00000460485 MX1P20591 662 aa17.32■□□□□ 0.36
ERCC3-205ENST00000460485 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
ERCC3-205ENST00000460485 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
ERCC3-205ENST00000460485 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
ERCC3-205ENST00000460485 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
ERCC3-205ENST00000460485 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
ERCC3-205ENST00000460485 YBX3P16989 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
ERCC3-205ENST00000460485 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
ERCC3-205ENST00000460485 NLGN2Q8NFZ4 835 aa17.31■□□□□ 0.36
ERCC3-205ENST00000460485 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
ERCC3-205ENST00000460485 BTAF1O14981 1849 aa17.31■□□□□ 0.36
ERCC3-205ENST00000460485 PNPLA7Q6ZV29 1317 aa17.3■□□□□ 0.36
ERCC3-205ENST00000460485 PDIA6Q15084 440 aa17.3■□□□□ 0.36
ERCC3-205ENST00000460485 PPP1R42Q7Z4L9 355 aa17.3■□□□□ 0.36
ERCC3-205ENST00000460485 GPBP1L1Q9HC44 474 aaPredicted RBP17.3■□□□□ 0.36
ERCC3-205ENST00000460485 ITGB4P16144 1822 aa17.3■□□□□ 0.36
ERCC3-205ENST00000460485 USP42Q9H9J4 1324 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms