RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
C4A-244ENST00000460060 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
C4A-244ENST00000460060 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
C4A-244ENST00000460060 NFIXQ14938 502 aa16.42■□□□□ 0.22
C4A-244ENST00000460060 NARFQ9UHQ1 456 aa16.42■□□□□ 0.22
C4A-244ENST00000460060 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
C4A-244ENST00000460060 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
C4A-244ENST00000460060 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
C4A-244ENST00000460060 MRC1P22897 1456 aa16.41■□□□□ 0.22
C4A-244ENST00000460060 RASSF7Q02833 373 aa16.4■□□□□ 0.22
C4A-244ENST00000460060 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
C4A-244ENST00000460060 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
C4A-244ENST00000460060 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
C4A-244ENST00000460060 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
C4A-244ENST00000460060 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.22
C4A-244ENST00000460060 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
C4A-244ENST00000460060 KCNQ3O43525 872 aa16.39■□□□□ 0.21
C4A-244ENST00000460060 SERPINB2P05120 415 aa16.39■□□□□ 0.21
C4A-244ENST00000460060 PRELPP51888 382 aa16.39■□□□□ 0.21
C4A-244ENST00000460060 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
C4A-244ENST00000460060 ZBTB1Q9Y2K1 713 aa16.39■□□□□ 0.21
C4A-244ENST00000460060 VIRMAQ69YN4 1812 aaKnown RBP16.39■□□□□ 0.21
C4A-244ENST00000460060 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
C4A-244ENST00000460060 VAMP4O75379 141 aa16.38■□□□□ 0.21
C4A-244ENST00000460060 LMNB1P20700 586 aa16.38■□□□□ 0.21
C4A-244ENST00000460060 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
C4A-244ENST00000460060 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
C4A-244ENST00000460060 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
C4A-244ENST00000460060 TTLL6Q8N841 843 aa16.38■□□□□ 0.21
C4A-244ENST00000460060 COL15A1P39059 1388 aa16.38■□□□□ 0.21
C4A-244ENST00000460060 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
C4A-244ENST00000460060 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
C4A-244ENST00000460060 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
C4A-244ENST00000460060 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
C4A-244ENST00000460060 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
C4A-244ENST00000460060 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
C4A-244ENST00000460060 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
C4A-244ENST00000460060 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
C4A-244ENST00000460060 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
C4A-244ENST00000460060 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
C4A-244ENST00000460060 C2CD5Q86YS7 1000 aa16.35■□□□□ 0.21
C4A-244ENST00000460060 H0YIN7 160 aa16.34■□□□□ 0.21
C4A-244ENST00000460060 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
C4A-244ENST00000460060 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
C4A-244ENST00000460060 NFKBIEO00221 500 aa16.33■□□□□ 0.2
C4A-244ENST00000460060 HOXB7P09629 217 aa16.33■□□□□ 0.2
C4A-244ENST00000460060 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
C4A-244ENST00000460060 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.2
C4A-244ENST00000460060 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
C4A-244ENST00000460060 POTECB2RU33 542 aa16.32■□□□□ 0.2
C4A-244ENST00000460060 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
C4A-244ENST00000460060 CARMIL3Q8ND23 1372 aa16.32■□□□□ 0.2
C4A-244ENST00000460060 SSH1Q8WYL5 1049 aa16.32■□□□□ 0.2
C4A-244ENST00000460060 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
C4A-244ENST00000460060 HEG1Q9ULI3 1381 aa16.32■□□□□ 0.2
C4A-244ENST00000460060 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
C4A-244ENST00000460060 A0A087WZG4 1122 aa16.31■□□□□ 0.2
C4A-244ENST00000460060 BCAR3O75815 825 aa16.31■□□□□ 0.2
C4A-244ENST00000460060 STARD3NLO95772 234 aa16.31■□□□□ 0.2
C4A-244ENST00000460060 SMC4Q9NTJ3 1288 aa16.31■□□□□ 0.2
C4A-244ENST00000460060 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
C4A-244ENST00000460060 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 DICER1Q9UPY3 1922 aaKnown RBP16.3■□□□□ 0.2
C4A-244ENST00000460060 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
C4A-244ENST00000460060 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.2
C4A-244ENST00000460060 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
C4A-244ENST00000460060 TIAM2Q8IVF5 1701 aa16.29■□□□□ 0.2
C4A-244ENST00000460060 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
C4A-244ENST00000460060 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
C4A-244ENST00000460060 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
C4A-244ENST00000460060 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
C4A-244ENST00000460060 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
C4A-244ENST00000460060 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
C4A-244ENST00000460060 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
C4A-244ENST00000460060 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
C4A-244ENST00000460060 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
C4A-244ENST00000460060 PDE6BP35913 854 aa16.28■□□□□ 0.2
C4A-244ENST00000460060 HDGFL1Q5TGJ6 251 aa16.28■□□□□ 0.2
C4A-244ENST00000460060 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
C4A-244ENST00000460060 FER1L6Q2WGJ9 1857 aa16.28■□□□□ 0.2
C4A-244ENST00000460060 C21orf2O43822 256 aa16.27■□□□□ 0.2
C4A-244ENST00000460060 CAPN15O75808 1086 aa16.27■□□□□ 0.2
C4A-244ENST00000460060 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.2
C4A-244ENST00000460060 BRPF1P55201 1214 aaPredicted RBP16.27■□□□□ 0.2
C4A-244ENST00000460060 PRR5LQ6MZQ0 368 aa16.27■□□□□ 0.2
C4A-244ENST00000460060 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
C4A-244ENST00000460060 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
C4A-244ENST00000460060 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
C4A-244ENST00000460060 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
C4A-244ENST00000460060 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
C4A-244ENST00000460060 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
C4A-244ENST00000460060 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
C4A-244ENST00000460060 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
C4A-244ENST00000460060 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
C4A-244ENST00000460060 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms