RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 RAB11FIP3O75154 756 aa20.18■□□□□ 0.82
CAPN13-203ENST00000458085 RBM25P49756 843 aaKnown RBP20.18■□□□□ 0.82
CAPN13-203ENST00000458085 TTLL7Q6ZT98 887 aa20.18■□□□□ 0.82
CAPN13-203ENST00000458085 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
CAPN13-203ENST00000458085 WNK3Q9BYP7 1800 aa20.18■□□□□ 0.82
CAPN13-203ENST00000458085 ATP5J2-PTCD1G3V325 749 aa20.18■□□□□ 0.82
CAPN13-203ENST00000458085 NUTM1Q86Y26 1132 aa20.18■□□□□ 0.82
CAPN13-203ENST00000458085 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
CAPN13-203ENST00000458085 TOM1O60784 492 aa20.17■□□□□ 0.82
CAPN13-203ENST00000458085 ATG3Q9NT62 314 aa20.17■□□□□ 0.82
CAPN13-203ENST00000458085 ERBB4Q15303 1308 aa20.17■□□□□ 0.82
CAPN13-203ENST00000458085 AFDNP55196 1824 aaKnown RBP20.17■□□□□ 0.82
CAPN13-203ENST00000458085 NBR1Q14596 966 aa20.16■□□□□ 0.82
CAPN13-203ENST00000458085 EPHA10Q5JZY3 1008 aa20.16■□□□□ 0.82
CAPN13-203ENST00000458085 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
CAPN13-203ENST00000458085 TBC1D2Q9BYX2 928 aa20.16■□□□□ 0.82
CAPN13-203ENST00000458085 EXOC5O00471 708 aa20.16■□□□□ 0.82
CAPN13-203ENST00000458085 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
CAPN13-203ENST00000458085 KIF1BPQ96EK5 621 aa20.15■□□□□ 0.82
CAPN13-203ENST00000458085 SPATA31A1Q5TZJ5 1347 aa20.15■□□□□ 0.82
CAPN13-203ENST00000458085 KIF2CQ99661 725 aa20.14■□□□□ 0.81
CAPN13-203ENST00000458085 BECN1Q14457 450 aa20.14■□□□□ 0.81
CAPN13-203ENST00000458085 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.81
CAPN13-203ENST00000458085 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
CAPN13-203ENST00000458085 BCL9O00512 1426 aa20.13■□□□□ 0.81
CAPN13-203ENST00000458085 NUP188Q5SRE5 1749 aa20.13■□□□□ 0.81
CAPN13-203ENST00000458085 OS9Q13438 667 aaPredicted RBP20.13■□□□□ 0.81
CAPN13-203ENST00000458085 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
CAPN13-203ENST00000458085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
CAPN13-203ENST00000458085 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
CAPN13-203ENST00000458085 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
CAPN13-203ENST00000458085 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
CAPN13-203ENST00000458085 UBAP1LF5GYI3 381 aa20.11■□□□□ 0.81
CAPN13-203ENST00000458085 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
CAPN13-203ENST00000458085 SLC4A9Q96Q91 983 aa20.11■□□□□ 0.81
CAPN13-203ENST00000458085 HSP90AB4PQ58FF6 505 aa20.11■□□□□ 0.81
CAPN13-203ENST00000458085 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
CAPN13-203ENST00000458085 A0A087WZG4 1122 aa20.1■□□□□ 0.81
CAPN13-203ENST00000458085 CASP7P55210 303 aa20.1■□□□□ 0.81
CAPN13-203ENST00000458085 LRP6O75581 1613 aa20.1■□□□□ 0.81
CAPN13-203ENST00000458085 PI4K2BQ8TCG2 481 aa20.1■□□□□ 0.81
CAPN13-203ENST00000458085 RILPL2Q969X0 211 aa20.09■□□□□ 0.81
CAPN13-203ENST00000458085 ZNF330Q9Y3S2 320 aaPredicted RBP20.09■□□□□ 0.81
CAPN13-203ENST00000458085 SLIT2O94813 1529 aa20.09■□□□□ 0.81
CAPN13-203ENST00000458085 SASH1O94885 1247 aa20.09■□□□□ 0.81
CAPN13-203ENST00000458085 PRIM1P49642 420 aaKnown RBP20.09■□□□□ 0.81
CAPN13-203ENST00000458085 USP26Q9BXU7 913 aa20.09■□□□□ 0.81
CAPN13-203ENST00000458085 SIL1Q9H173 461 aa20.09■□□□□ 0.81
CAPN13-203ENST00000458085 AOX1Q06278 1338 aa20.08■□□□□ 0.81
CAPN13-203ENST00000458085 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.81
CAPN13-203ENST00000458085 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.81
CAPN13-203ENST00000458085 DOT1LQ8TEK3 1739 aa20.08■□□□□ 0.81
CAPN13-203ENST00000458085 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
CAPN13-203ENST00000458085 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
CAPN13-203ENST00000458085 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
CAPN13-203ENST00000458085 DDB1Q16531 1140 aa20.07■□□□□ 0.8
CAPN13-203ENST00000458085 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
CAPN13-203ENST00000458085 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
CAPN13-203ENST00000458085 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
CAPN13-203ENST00000458085 THRAP3Q9Y2W1 955 aaKnown RBP20.07■□□□□ 0.8
CAPN13-203ENST00000458085 TJP1Q07157 1748 aa20.07■□□□□ 0.8
CAPN13-203ENST00000458085 SLKQ9H2G2 1235 aaPredicted RBP20.06■□□□□ 0.8
CAPN13-203ENST00000458085 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
CAPN13-203ENST00000458085 RABL6Q3YEC7 729 aaPredicted RBP20.06■□□□□ 0.8
CAPN13-203ENST00000458085 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
CAPN13-203ENST00000458085 NWD2Q9ULI1 1742 aa20.06■□□□□ 0.8
CAPN13-203ENST00000458085 H7C1W4 665 aa20.05■□□□□ 0.8
CAPN13-203ENST00000458085 RFX5P48382 616 aaPredicted RBP20.05■□□□□ 0.8
CAPN13-203ENST00000458085 CLASRPQ8N2M8 674 aaKnown RBP20.05■□□□□ 0.8
CAPN13-203ENST00000458085 SPRYD3Q8NCJ5 442 aa20.05■□□□□ 0.8
CAPN13-203ENST00000458085 CDCA7Q9BWT1 371 aaPredicted RBP20.05■□□□□ 0.8
CAPN13-203ENST00000458085 CHMLP26374 656 aa20.05■□□□□ 0.8
CAPN13-203ENST00000458085 G3BP1Q13283 466 aaKnown RBP eCLIP20.05■□□□□ 0.8
CAPN13-203ENST00000458085 ERC1Q8IUD2 1116 aa20.05■□□□□ 0.8
CAPN13-203ENST00000458085 ACSBG1Q96GR2 724 aa20.05■□□□□ 0.8
CAPN13-203ENST00000458085 TEX13AQ9BXU3 409 aaPredicted RBP20.05■□□□□ 0.8
CAPN13-203ENST00000458085 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
CAPN13-203ENST00000458085 COL15A1P39059 1388 aa20.04■□□□□ 0.8
CAPN13-203ENST00000458085 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
CAPN13-203ENST00000458085 USP42Q9H9J4 1324 aaKnown RBP20.04■□□□□ 0.8
CAPN13-203ENST00000458085 ERC2O15083 957 aa20.04■□□□□ 0.8
CAPN13-203ENST00000458085 STARD3NLO95772 234 aa20.04■□□□□ 0.8
CAPN13-203ENST00000458085 CYP19A1P11511 503 aaPredicted RBP20.03■□□□□ 0.8
CAPN13-203ENST00000458085 FOXO4P98177 505 aa20.03■□□□□ 0.8
CAPN13-203ENST00000458085 PTPN12Q05209 780 aaKnown RBP20.03■□□□□ 0.8
CAPN13-203ENST00000458085 AACSQ86V21 672 aa20.03■□□□□ 0.8
CAPN13-203ENST00000458085 EAF2Q96CJ1 260 aaPredicted RBP20.03■□□□□ 0.8
CAPN13-203ENST00000458085 ESYT1Q9BSJ8 1104 aa20.03■□□□□ 0.8
CAPN13-203ENST00000458085 A0A0G2JS52 829 aa20.02■□□□□ 0.8
CAPN13-203ENST00000458085 IL25Q9H293 177 aa20.02■□□□□ 0.8
CAPN13-203ENST00000458085 ANTXR1Q9H6X2 564 aa20.02■□□□□ 0.8
CAPN13-203ENST00000458085 AK9Q5TCS8 1911 aa20.02■□□□□ 0.8
CAPN13-203ENST00000458085 LMBR1LQ6UX01 489 aa20.02■□□□□ 0.8
CAPN13-203ENST00000458085 CCDC191Q8NCU4 936 aa20.01■□□□□ 0.79
CAPN13-203ENST00000458085 SNX21Q969T3 373 aa20.01■□□□□ 0.79
CAPN13-203ENST00000458085 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
CAPN13-203ENST00000458085 ISCA1Q9BUE6 129 aa20.01■□□□□ 0.79
CAPN13-203ENST00000458085 CCDC8Q9H0W5 538 aaPredicted RBP20.01■□□□□ 0.79
CAPN13-203ENST00000458085 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
CAPN13-203ENST00000458085 TLR7Q9NYK1 1049 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms