RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
SHF-202ENST00000458022 C7orf43Q8WVR3 580 aa22.04■■□□□ 1.12
SHF-202ENST00000458022 AIDAQ96BJ3 306 aa22.04■■□□□ 1.12
SHF-202ENST00000458022 TMEM88BA6NKF7 163 aa22.03■■□□□ 1.12
SHF-202ENST00000458022 NPHP1O15259 732 aa22.03■■□□□ 1.12
SHF-202ENST00000458022 VEGFBP49765 207 aa22.03■■□□□ 1.12
SHF-202ENST00000458022 A1BGP04217 495 aa22.02■■□□□ 1.12
SHF-202ENST00000458022 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.12
SHF-202ENST00000458022 FMNL2Q96PY5 1086 aa22.02■■□□□ 1.12
SHF-202ENST00000458022 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
SHF-202ENST00000458022 CCDC93Q567U6 631 aa22.01■■□□□ 1.11
SHF-202ENST00000458022 WBP1LQ9NX94 342 aa22.01■■□□□ 1.11
SHF-202ENST00000458022 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
SHF-202ENST00000458022 GAS2L2Q8NHY3 880 aa22■■□□□ 1.11
SHF-202ENST00000458022 DZIP3Q86Y13 1208 aaKnown RBP21.99■■□□□ 1.11
SHF-202ENST00000458022 ZNF541Q9H0D2 1346 aa21.99■■□□□ 1.11
SHF-202ENST00000458022 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
SHF-202ENST00000458022 KLRG2A4D1S0 409 aaPredicted RBP21.98■■□□□ 1.11
SHF-202ENST00000458022 NPR1P16066 1061 aa21.98■■□□□ 1.11
SHF-202ENST00000458022 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.11
SHF-202ENST00000458022 EAPPQ56P03 285 aaPredicted RBP21.98■■□□□ 1.11
SHF-202ENST00000458022 CLEC4GQ6UXB4 293 aa21.98■■□□□ 1.11
SHF-202ENST00000458022 HACL1Q9UJ83 578 aa21.98■■□□□ 1.11
SHF-202ENST00000458022 SCN4AP35499 1836 aa21.97■■□□□ 1.11
SHF-202ENST00000458022 RASSF10A6NK89 507 aa21.97■■□□□ 1.11
SHF-202ENST00000458022 LBX1P52954 281 aa21.97■■□□□ 1.11
SHF-202ENST00000458022 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
SHF-202ENST00000458022 CEMIPQ8WUJ3 1361 aa21.97■■□□□ 1.11
SHF-202ENST00000458022 EPHX2P34913 555 aa21.96■■□□□ 1.11
SHF-202ENST00000458022 ZNF277Q9NRM2 450 aaPredicted RBP21.96■■□□□ 1.11
SHF-202ENST00000458022 ARFGEF2Q9Y6D5 1785 aa21.96■■□□□ 1.11
SHF-202ENST00000458022 PNMA8AQ86V59 439 aaPredicted RBP21.95■■□□□ 1.1
SHF-202ENST00000458022 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
SHF-202ENST00000458022 PER1O15534 1290 aaPredicted RBP21.94■■□□□ 1.1
SHF-202ENST00000458022 KCNQ3O43525 872 aa21.94■■□□□ 1.1
SHF-202ENST00000458022 RTKN2Q8IZC4 609 aa21.94■■□□□ 1.1
SHF-202ENST00000458022 CLEC11AQ9Y240 323 aa21.94■■□□□ 1.1
SHF-202ENST00000458022 ZNF652Q9Y2D9 606 aa21.94■■□□□ 1.1
SHF-202ENST00000458022 BTBD11A6QL63 1104 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 FZD9O00144 591 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 RGL2O15211 777 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 HSPA8P11142 646 aaKnown RBP21.93■■□□□ 1.1
SHF-202ENST00000458022 DEFB115Q30KQ5 88 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 CNTROBQ8N137 903 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 ADAMTSL1Q8N6G6 1762 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 USP16Q9Y5T5 823 aa21.93■■□□□ 1.1
SHF-202ENST00000458022 SIPA1L3O60292 1781 aaPredicted RBP21.92■■□□□ 1.1
SHF-202ENST00000458022 BCORQ6W2J9 1755 aa21.92■■□□□ 1.1
SHF-202ENST00000458022 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
SHF-202ENST00000458022 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
SHF-202ENST00000458022 SLC34A2O95436 690 aa21.92■■□□□ 1.1
SHF-202ENST00000458022 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
SHF-202ENST00000458022 KIF7Q2M1P5 1343 aa21.91■■□□□ 1.1
SHF-202ENST00000458022 PIP4K2AP48426 406 aaPredicted RBP21.91■■□□□ 1.1
SHF-202ENST00000458022 MAP2K1Q02750 393 aaPredicted RBP21.91■■□□□ 1.1
SHF-202ENST00000458022 CC2D1BQ5T0F9 858 aaKnown RBP21.91■■□□□ 1.1
SHF-202ENST00000458022 MAP1SQ66K74 1059 aaPredicted RBP21.91■■□□□ 1.1
SHF-202ENST00000458022 TPTE2Q6XPS3 522 aa21.91■■□□□ 1.1
SHF-202ENST00000458022 ABHD8Q96I13 439 aa21.91■■□□□ 1.1
SHF-202ENST00000458022 WDR33Q9C0J8 1336 aaKnown RBP21.9■■□□□ 1.1
SHF-202ENST00000458022 IARSP41252 1262 aaKnown RBP21.9■■□□□ 1.1
SHF-202ENST00000458022 GPC2Q8N158 579 aa21.9■■□□□ 1.1
SHF-202ENST00000458022 NIP7Q9Y221 180 aaKnown RBP eCLIP21.89■■□□□ 1.09
SHF-202ENST00000458022 PRAMEF22A3QJZ6 481 aa21.88■■□□□ 1.09
SHF-202ENST00000458022 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
SHF-202ENST00000458022 ALDH1B1P30837 517 aa21.88■■□□□ 1.09
SHF-202ENST00000458022 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
SHF-202ENST00000458022 SNED1Q8TER0 1413 aa21.88■■□□□ 1.09
SHF-202ENST00000458022 CACNA1SQ13698 1873 aa21.88■■□□□ 1.09
SHF-202ENST00000458022 PHACTR3Q96KR7 559 aa21.87■■□□□ 1.09
SHF-202ENST00000458022 PSMD1Q99460 953 aa21.87■■□□□ 1.09
SHF-202ENST00000458022 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
SHF-202ENST00000458022 ABT1Q9ULW3 272 aaKnown RBP21.87■■□□□ 1.09
SHF-202ENST00000458022 DDX21Q9NR30 783 aaKnown RBP eCLIP21.86■■□□□ 1.09
SHF-202ENST00000458022 NPC1L1Q9UHC9 1359 aa21.86■■□□□ 1.09
SHF-202ENST00000458022 NBPF26B4DH59 902 aa21.85■■□□□ 1.09
SHF-202ENST00000458022 NBPF10Q6P3W6 841 aaKnown RBP21.85■■□□□ 1.09
SHF-202ENST00000458022 NBPF15Q8N660 670 aa21.85■■□□□ 1.09
SHF-202ENST00000458022 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
SHF-202ENST00000458022 FAM161AQ3B820 660 aa21.84■■□□□ 1.09
SHF-202ENST00000458022 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
SHF-202ENST00000458022 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
SHF-202ENST00000458022 CC2D2BQ6DHV5 1058 aa21.83■■□□□ 1.09
SHF-202ENST00000458022 RSPH6AQ9H0K4 717 aa21.83■■□□□ 1.09
SHF-202ENST00000458022 FAM177BA6PVY3 158 aa21.82■■□□□ 1.08
SHF-202ENST00000458022 EIF6P56537 245 aaKnown RBP21.82■■□□□ 1.08
SHF-202ENST00000458022 ECE1P42892 770 aa21.81■■□□□ 1.08
SHF-202ENST00000458022 HLFQ16534 295 aa21.81■■□□□ 1.08
SHF-202ENST00000458022 CAPNS2Q96L46 248 aa21.81■■□□□ 1.08
SHF-202ENST00000458022 THSD7BQ9C0I4 1608 aa21.8■■□□□ 1.08
SHF-202ENST00000458022 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
SHF-202ENST00000458022 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
SHF-202ENST00000458022 SCNN1DP51172 638 aa21.8■■□□□ 1.08
SHF-202ENST00000458022 GJA3Q9Y6H8 435 aa21.8■■□□□ 1.08
SHF-202ENST00000458022 COL4A5P29400 1685 aa21.79■■□□□ 1.08
SHF-202ENST00000458022 RTF1Q92541 710 aaKnown RBP21.79■■□□□ 1.08
SHF-202ENST00000458022 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
SHF-202ENST00000458022 EPS15P42566 896 aa21.78■■□□□ 1.08
SHF-202ENST00000458022 FMR1Q06787 632 aaKnown RBP eCLIP21.78■■□□□ 1.08
SHF-202ENST00000458022 GRIPAP1Q4V328 841 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms