RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 ZNF652Q9Y2D9 606 aa23.42■■□□□ 1.34
TRIM13-206ENST00000457662 TTLL7Q6ZT98 887 aa23.41■■□□□ 1.34
TRIM13-206ENST00000457662 COPS6Q7L5N1 327 aa23.41■■□□□ 1.34
TRIM13-206ENST00000457662 STK31Q9BXU1 1019 aa23.41■■□□□ 1.34
TRIM13-206ENST00000457662 ZBED9Q6R2W3 1325 aa23.41■■□□□ 1.34
TRIM13-206ENST00000457662 TM4SF1P30408 202 aa23.4■■□□□ 1.34
TRIM13-206ENST00000457662 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
TRIM13-206ENST00000457662 MAP3K15Q6ZN16 1313 aa23.4■■□□□ 1.34
TRIM13-206ENST00000457662 AIMP1Q12904 312 aaKnown RBP23.39■■□□□ 1.34
TRIM13-206ENST00000457662 PARP3Q9Y6F1 533 aa23.39■■□□□ 1.34
TRIM13-206ENST00000457662 NFIXQ14938 502 aa23.38■■□□□ 1.33
TRIM13-206ENST00000457662 HLFQ16534 295 aa23.36■■□□□ 1.33
TRIM13-206ENST00000457662 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
TRIM13-206ENST00000457662 ZBTB3Q9H5J0 574 aa23.36■■□□□ 1.33
TRIM13-206ENST00000457662 SLC4A2P04920 1241 aa23.36■■□□□ 1.33
TRIM13-206ENST00000457662 SETDB2Q96T68 719 aa23.36■■□□□ 1.33
TRIM13-206ENST00000457662 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
TRIM13-206ENST00000457662 GIGYF2Q6Y7W6 1299 aaKnown RBP23.35■■□□□ 1.33
TRIM13-206ENST00000457662 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
TRIM13-206ENST00000457662 ANKRD13DQ6ZTN6 518 aa23.35■■□□□ 1.33
TRIM13-206ENST00000457662 POLRMTO00411 1230 aaKnown RBP23.34■■□□□ 1.33
TRIM13-206ENST00000457662 CT47B1P0C2W7 299 aaPredicted RBP23.34■■□□□ 1.33
TRIM13-206ENST00000457662 DDR1Q08345 913 aa23.34■■□□□ 1.33
TRIM13-206ENST00000457662 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
TRIM13-206ENST00000457662 PHAXQ9H814 394 aaKnown RBP23.34■■□□□ 1.33
TRIM13-206ENST00000457662 SCN7AQ01118 1682 aa23.34■■□□□ 1.33
TRIM13-206ENST00000457662 PLBD2Q8NHP8 589 aa23.33■■□□□ 1.33
TRIM13-206ENST00000457662 BCORQ6W2J9 1755 aa23.33■■□□□ 1.32
TRIM13-206ENST00000457662 SERPINB2P05120 415 aa23.32■■□□□ 1.32
TRIM13-206ENST00000457662 DDX58O95786 925 aaKnown RBP23.31■■□□□ 1.32
TRIM13-206ENST00000457662 HSP90AB3PQ58FF7 597 aa23.31■■□□□ 1.32
TRIM13-206ENST00000457662 NIP7Q9Y221 180 aaKnown RBP eCLIP23.31■■□□□ 1.32
TRIM13-206ENST00000457662 FHDC1Q9C0D6 1143 aaPredicted RBP23.3■■□□□ 1.32
TRIM13-206ENST00000457662 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
TRIM13-206ENST00000457662 CACNA1FO60840 1977 aa23.3■■□□□ 1.32
TRIM13-206ENST00000457662 CARMIL3Q8ND23 1372 aa23.3■■□□□ 1.32
TRIM13-206ENST00000457662 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
TRIM13-206ENST00000457662 RIC3Q7Z5B4 369 aa23.3■■□□□ 1.32
TRIM13-206ENST00000457662 TCIRG1Q13488 830 aa23.29■■□□□ 1.32
TRIM13-206ENST00000457662 ZNF34Q8IZ26 560 aa23.29■■□□□ 1.32
TRIM13-206ENST00000457662 KLHL34Q8N239 644 aa23.29■■□□□ 1.32
TRIM13-206ENST00000457662 SYT17Q9BSW7 474 aa23.29■■□□□ 1.32
TRIM13-206ENST00000457662 NUP98P52948 1817 aa23.29■■□□□ 1.32
TRIM13-206ENST00000457662 ATP10DQ9P241 1426 aa23.28■■□□□ 1.32
TRIM13-206ENST00000457662 G2E3Q7L622 706 aa23.28■■□□□ 1.32
TRIM13-206ENST00000457662 FLIIQ13045 1269 aa23.27■■□□□ 1.32
TRIM13-206ENST00000457662 ALDH1L2Q3SY69 923 aa23.26■■□□□ 1.31
TRIM13-206ENST00000457662 KSR2Q6VAB6 950 aa23.26■■□□□ 1.31
TRIM13-206ENST00000457662 TPTE2Q6XPS3 522 aa23.26■■□□□ 1.31
TRIM13-206ENST00000457662 NBPF5PQ86XG9 351 aaPredicted RBP23.26■■□□□ 1.31
TRIM13-206ENST00000457662 GPTP24298 496 aa23.25■■□□□ 1.31
TRIM13-206ENST00000457662 PARP10Q53GL7 1025 aa23.25■■□□□ 1.31
TRIM13-206ENST00000457662 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 NPHP1O15259 732 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 SSH1Q8WYL5 1049 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 FKBP5Q13451 457 aaPredicted RBP23.24■■□□□ 1.31
TRIM13-206ENST00000457662 PPP1R42Q7Z4L9 355 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
TRIM13-206ENST00000457662 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 NYXQ9GZU5 481 aa23.24■■□□□ 1.31
TRIM13-206ENST00000457662 TGFB2P61812 414 aa23.23■■□□□ 1.31
TRIM13-206ENST00000457662 TRIM28Q13263 835 aaKnown RBP23.23■■□□□ 1.31
TRIM13-206ENST00000457662 PRR5LQ6MZQ0 368 aa23.23■■□□□ 1.31
TRIM13-206ENST00000457662 METTL22Q9BUU2 404 aaPredicted RBP23.23■■□□□ 1.31
TRIM13-206ENST00000457662 MAP3K2Q9Y2U5 619 aa23.23■■□□□ 1.31
TRIM13-206ENST00000457662 UBN2Q6ZU65 1347 aa23.22■■□□□ 1.31
TRIM13-206ENST00000457662 AFDNP55196 1824 aaKnown RBP23.22■■□□□ 1.31
TRIM13-206ENST00000457662 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
TRIM13-206ENST00000457662 GTF2E1P29083 439 aaPredicted RBP23.22■■□□□ 1.31
TRIM13-206ENST00000457662 SUSD4Q5VX71 490 aa23.22■■□□□ 1.31
TRIM13-206ENST00000457662 C10orf71Q711Q0 1435 aa23.22■■□□□ 1.31
TRIM13-206ENST00000457662 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
TRIM13-206ENST00000457662 NRXN2Q9P2S2 1712 aa23.21■■□□□ 1.31
TRIM13-206ENST00000457662 ST5P78524 1137 aa23.21■■□□□ 1.31
TRIM13-206ENST00000457662 NLRP10Q86W26 655 aa23.21■■□□□ 1.31
TRIM13-206ENST00000457662 BRIP1Q9BX63 1249 aa23.2■■□□□ 1.3
TRIM13-206ENST00000457662 SMC4Q9NTJ3 1288 aa23.2■■□□□ 1.3
TRIM13-206ENST00000457662 ADCY9O60503 1353 aa23.2■■□□□ 1.3
TRIM13-206ENST00000457662 ATP5J2-PTCD1G3V325 749 aa23.19■■□□□ 1.3
TRIM13-206ENST00000457662 RARSP54136 660 aaKnown RBP23.19■■□□□ 1.3
TRIM13-206ENST00000457662 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
TRIM13-206ENST00000457662 NLGN2Q8NFZ4 835 aa23.19■■□□□ 1.3
TRIM13-206ENST00000457662 MYD88Q99836 296 aa23.19■■□□□ 1.3
TRIM13-206ENST00000457662 UTP14AQ9BVJ6 771 aaKnown RBP23.19■■□□□ 1.3
TRIM13-206ENST00000457662 IBTKQ9P2D0 1353 aaPredicted RBP23.19■■□□□ 1.3
TRIM13-206ENST00000457662 BRPF1P55201 1214 aaPredicted RBP23.18■■□□□ 1.3
TRIM13-206ENST00000457662 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
TRIM13-206ENST00000457662 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
TRIM13-206ENST00000457662 BCL2L13Q9BXK5 485 aa23.18■■□□□ 1.3
TRIM13-206ENST00000457662 PDE6BP35913 854 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 ANKRD36CQ5JPF3 1778 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 NTSR2O95665 410 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 CCDC191Q8NCU4 936 aa23.17■■□□□ 1.3
TRIM13-206ENST00000457662 TRMT112Q9UI30 125 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms