RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 DEF6Q9H4E7 631 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 ZBTB3Q9H5J0 574 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 PIK3C2GO75747 1445 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 BAG4O95429 457 aaKnown RBP11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 CKAP2LQ8IYA6 745 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 DDX11Q96FC9 970 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 RTCBQ9Y3I0 505 aaKnown RBP11.46□□□□□ -0.57
MSC-AS1-201ENST00000457356 SMARCA5O60264 1052 aaPredicted RBP11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 RARSP54136 660 aaKnown RBP11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 MAP3K11Q16584 847 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 KRT27Q7Z3Y8 459 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 SSH1Q8WYL5 1049 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 ZNF622Q969S3 477 aaKnown RBP eCLIP11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 JAKMIP1Q96N16 626 aaKnown RBP11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 AGLP35573 1532 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 ERBB4Q15303 1308 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 PCDH11XQ9BZA7 1347 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 PCDH11YQ9BZA8 1340 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 FILIP1LQ4L180 1135 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 CENPHQ9H3R5 247 aa11.46□□□□□ -0.58
MSC-AS1-201ENST00000457356 EIF2AK4Q9P2K8 1649 aaKnown RBP11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 ERICH2A1L162 156 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 DUSP27Q5VZP5 1158 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 UNC5CLQ8IV45 518 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 CAMSAP1Q5T5Y3 1602 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 JCADQ9P266 1359 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 CLTCQ00610 1675 aaKnown RBP11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 CCP110O43303 1012 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 TRIM37O94972 964 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 BLOC1S2Q6QNY1 142 aa11.45□□□□□ -0.58
MSC-AS1-201ENST00000457356 FAM83GA6ND36 823 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 KIF18AQ8NI77 898 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 ZNF396Q96N95 335 aaPredicted RBP11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 PTPRTO14522 1441 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 PLXNC1O60486 1568 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 CCDC83Q8IWF9 413 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 CEP57L1Q8IYX8 460 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 DCAF5Q96JK2 942 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 SIL1Q9H173 461 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 GNPATO15228 680 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 ADCY5O95622 1261 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 TBC1D32Q96NH3 1257 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 TRMT112Q9UI30 125 aaKnown RBP11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 LRRFIP2Q9Y608 721 aaKnown RBP11.44□□□□□ -0.58
MSC-AS1-201ENST00000457356 EDC4Q6P2E9 1401 aaKnown RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 KIAA0754O94854 1291 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 CFAP100Q494V2 611 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 DYNC1I1O14576 645 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 ERLIN1O75477 346 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 HCLS1P14317 486 aaPredicted RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 RBM6P78332 1123 aaKnown RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 CCDC57Q2TAC2 916 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 PPFIBP1Q86W92 1011 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 TFIP11Q9UBB9 837 aaKnown RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 FAM196AQ6ZSG2 479 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 PDRG1Q9NUG6 133 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 A0A087WZG4 1122 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 EIF3JO75822 258 aaKnown RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 TAF3Q5VWG9 929 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 NBPF5PQ86XG9 351 aaPredicted RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
MSC-AS1-201ENST00000457356 SPATA31A3Q5VYP0 1347 aa11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 SMARCE1Q969G3 411 aa11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 ADGRL3Q9HAR2 1447 aa11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 KLHL40Q2TBA0 621 aa11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 TTC12Q9H892 705 aaPredicted RBP11.42□□□□□ -0.58
MSC-AS1-201ENST00000457356 SRGAP3O43295 1099 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 CASTP20810 708 aaKnown RBP11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 PRR36Q9H6K5 1346 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 SPATA31E1Q6ZUB1 1445 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 AMOTL1Q8IY63 956 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 SETDB2Q96T68 719 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 CALCOCO1Q9P1Z2 691 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 TET3O43151 1660 aa11.41□□□□□ -0.58
MSC-AS1-201ENST00000457356 IGHMBP2P38935 993 aaKnown RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 CT47A1Q5JQC4 288 aaPredicted RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 CCDC183Q5T5S1 534 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 ZBTB9Q96C00 473 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 DBF4Q9UBU7 674 aaPredicted RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 PARP3Q9Y6F1 533 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms