RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 POLD1P28340 1107 aa18.2■□□□□ 0.5
SMPD4-215ENST00000457039 TM4SF1P30408 202 aa18.2■□□□□ 0.5
SMPD4-215ENST00000457039 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
SMPD4-215ENST00000457039 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
SMPD4-215ENST00000457039 ARXQ96QS3 562 aa18.2■□□□□ 0.5
SMPD4-215ENST00000457039 MMP10P09238 476 aa18.19■□□□□ 0.5
SMPD4-215ENST00000457039 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
SMPD4-215ENST00000457039 TCERG1O14776 1098 aaKnown RBP18.18■□□□□ 0.5
SMPD4-215ENST00000457039 DDR1Q08345 913 aa18.18■□□□□ 0.5
SMPD4-215ENST00000457039 NFIXQ14938 502 aa18.18■□□□□ 0.5
SMPD4-215ENST00000457039 HLFQ16534 295 aa18.18■□□□□ 0.5
SMPD4-215ENST00000457039 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
SMPD4-215ENST00000457039 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
SMPD4-215ENST00000457039 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
SMPD4-215ENST00000457039 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
SMPD4-215ENST00000457039 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
SMPD4-215ENST00000457039 POLRMTO00411 1230 aaKnown RBP18.16■□□□□ 0.5
SMPD4-215ENST00000457039 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
SMPD4-215ENST00000457039 CT47B1P0C2W7 299 aaPredicted RBP18.16■□□□□ 0.5
SMPD4-215ENST00000457039 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
SMPD4-215ENST00000457039 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
SMPD4-215ENST00000457039 ATP10DQ9P241 1426 aa18.15■□□□□ 0.5
SMPD4-215ENST00000457039 NUP98P52948 1817 aa18.15■□□□□ 0.5
SMPD4-215ENST00000457039 GIGYF2Q6Y7W6 1299 aaKnown RBP18.15■□□□□ 0.5
SMPD4-215ENST00000457039 G2E3Q7L622 706 aa18.15■□□□□ 0.5
SMPD4-215ENST00000457039 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
SMPD4-215ENST00000457039 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.49
SMPD4-215ENST00000457039 PLBD2Q8NHP8 589 aa18.14■□□□□ 0.49
SMPD4-215ENST00000457039 PARP3Q9Y6F1 533 aa18.14■□□□□ 0.49
SMPD4-215ENST00000457039 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
SMPD4-215ENST00000457039 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
SMPD4-215ENST00000457039 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
SMPD4-215ENST00000457039 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
SMPD4-215ENST00000457039 CARMIL3Q8ND23 1372 aa18.13■□□□□ 0.49
SMPD4-215ENST00000457039 SETDB2Q96T68 719 aa18.12■□□□□ 0.49
SMPD4-215ENST00000457039 PPP1R1BQ9UD71 204 aaPredicted RBP18.12■□□□□ 0.49
SMPD4-215ENST00000457039 C10orf71Q711Q0 1435 aa18.12■□□□□ 0.49
SMPD4-215ENST00000457039 SERPINB2P05120 415 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 FLIIQ13045 1269 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 MRPL50Q8N5N7 158 aaKnown RBP18.11■□□□□ 0.49
SMPD4-215ENST00000457039 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 FHDC1Q9C0D6 1143 aaPredicted RBP18.11■□□□□ 0.49
SMPD4-215ENST00000457039 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMPD4-215ENST00000457039 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 ADCY9O60503 1353 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 ARFGEF2Q9Y6D5 1785 aa18.11■□□□□ 0.49
SMPD4-215ENST00000457039 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
SMPD4-215ENST00000457039 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
SMPD4-215ENST00000457039 HSP90AB3PQ58FF7 597 aa18.1■□□□□ 0.49
SMPD4-215ENST00000457039 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
SMPD4-215ENST00000457039 ANKRD36CQ5JPF3 1778 aa18.09■□□□□ 0.49
SMPD4-215ENST00000457039 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
SMPD4-215ENST00000457039 KSR2Q6VAB6 950 aa18.09■□□□□ 0.49
SMPD4-215ENST00000457039 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
SMPD4-215ENST00000457039 ISCA1Q9BUE6 129 aa18.09■□□□□ 0.49
SMPD4-215ENST00000457039 CD2APQ9Y5K6 639 aa18.09■□□□□ 0.49
SMPD4-215ENST00000457039 IBTKQ9P2D0 1353 aaPredicted RBP18.08■□□□□ 0.49
SMPD4-215ENST00000457039 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.48
SMPD4-215ENST00000457039 GPTP24298 496 aa18.08■□□□□ 0.48
SMPD4-215ENST00000457039 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.48
SMPD4-215ENST00000457039 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
SMPD4-215ENST00000457039 BRPF1P55201 1214 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-215ENST00000457039 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
SMPD4-215ENST00000457039 SYT17Q9BSW7 474 aa18.07■□□□□ 0.48
SMPD4-215ENST00000457039 MAP3K2Q9Y2U5 619 aa18.07■□□□□ 0.48
SMPD4-215ENST00000457039 TRIM28Q13263 835 aaKnown RBP18.06■□□□□ 0.48
SMPD4-215ENST00000457039 FKBP5Q13451 457 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-215ENST00000457039 PARP10Q53GL7 1025 aa18.06■□□□□ 0.48
SMPD4-215ENST00000457039 SUSD4Q5VX71 490 aa18.06■□□□□ 0.48
SMPD4-215ENST00000457039 NLRP10Q86W26 655 aa18.06■□□□□ 0.48
SMPD4-215ENST00000457039 NBPF5PQ86XG9 351 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-215ENST00000457039 YTHDC1Q96MU7 727 aaKnown RBP18.06■□□□□ 0.48
SMPD4-215ENST00000457039 METTL22Q9BUU2 404 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-215ENST00000457039 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
SMPD4-215ENST00000457039 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
SMPD4-215ENST00000457039 NTSR2O95665 410 aa18.05■□□□□ 0.48
SMPD4-215ENST00000457039 CNBD1Q8NA66 436 aa18.05■□□□□ 0.48
SMPD4-215ENST00000457039 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
SMPD4-215ENST00000457039 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
SMPD4-215ENST00000457039 TPTE2Q6XPS3 522 aa18.04■□□□□ 0.48
SMPD4-215ENST00000457039 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
SMPD4-215ENST00000457039 NLGN2Q8NFZ4 835 aa18.04■□□□□ 0.48
SMPD4-215ENST00000457039 MYD88Q99836 296 aa18.04■□□□□ 0.48
SMPD4-215ENST00000457039 PTPRCP08575 1304 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 FAM177BA6PVY3 158 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 IGKV5-2P06315 115 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 ANKRD31Q8N7Z5 1873 aa18.03■□□□□ 0.48
SMPD4-215ENST00000457039 TGFB2P61812 414 aa18.02■□□□□ 0.48
SMPD4-215ENST00000457039 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
SMPD4-215ENST00000457039 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
SMPD4-215ENST00000457039 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
SMPD4-215ENST00000457039 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
SMPD4-215ENST00000457039 ABCC12Q96J65 1359 aa18.02■□□□□ 0.47
SMPD4-215ENST00000457039 RNF123Q5XPI4 1314 aa18.01■□□□□ 0.47
SMPD4-215ENST00000457039 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
SMPD4-215ENST00000457039 F6X3S4 739 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms