RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
CASC4P1-201ENST00000456608 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
CASC4P1-201ENST00000456608 USP44Q9H0E7 712 aa16.39■□□□□ 0.21
CASC4P1-201ENST00000456608 RPAP2Q8IXW5 612 aaPredicted RBP16.38■□□□□ 0.21
CASC4P1-201ENST00000456608 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
CASC4P1-201ENST00000456608 ANKRD44Q8N8A2 993 aa16.38■□□□□ 0.21
CASC4P1-201ENST00000456608 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
CASC4P1-201ENST00000456608 PLBD2Q8NHP8 589 aa16.38■□□□□ 0.21
CASC4P1-201ENST00000456608 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
CASC4P1-201ENST00000456608 GNAI2P04899 355 aa16.37■□□□□ 0.21
CASC4P1-201ENST00000456608 SIK1P57059 783 aa16.37■□□□□ 0.21
CASC4P1-201ENST00000456608 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
CASC4P1-201ENST00000456608 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
CASC4P1-201ENST00000456608 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
CASC4P1-201ENST00000456608 FAM182BQ5T319 152 aa16.36■□□□□ 0.21
CASC4P1-201ENST00000456608 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
CASC4P1-201ENST00000456608 TAF1LQ8IZX4 1826 aa16.36■□□□□ 0.21
CASC4P1-201ENST00000456608 NUP98P52948 1817 aa16.35■□□□□ 0.21
CASC4P1-201ENST00000456608 IGKV5-2P06315 115 aa16.35■□□□□ 0.21
CASC4P1-201ENST00000456608 UBTFL1P0CB47 393 aaPredicted RBP16.35■□□□□ 0.21
CASC4P1-201ENST00000456608 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
CASC4P1-201ENST00000456608 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
CASC4P1-201ENST00000456608 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
CASC4P1-201ENST00000456608 ITPK1Q13572 414 aa16.34■□□□□ 0.21
CASC4P1-201ENST00000456608 CWF19L2Q2TBE0 894 aaKnown RBP16.34■□□□□ 0.21
CASC4P1-201ENST00000456608 MYD88Q99836 296 aa16.34■□□□□ 0.21
CASC4P1-201ENST00000456608 PDZRN3Q9UPQ7 1066 aa16.34■□□□□ 0.21
CASC4P1-201ENST00000456608 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
CASC4P1-201ENST00000456608 UTYO14607 1347 aa16.33■□□□□ 0.21
CASC4P1-201ENST00000456608 NEURL1BA8MQ27 555 aa16.33■□□□□ 0.2
CASC4P1-201ENST00000456608 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
CASC4P1-201ENST00000456608 KRT27Q7Z3Y8 459 aa16.33■□□□□ 0.2
CASC4P1-201ENST00000456608 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
CASC4P1-201ENST00000456608 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
CASC4P1-201ENST00000456608 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
CASC4P1-201ENST00000456608 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
CASC4P1-201ENST00000456608 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
CASC4P1-201ENST00000456608 GRM8O00222 908 aa16.31■□□□□ 0.2
CASC4P1-201ENST00000456608 ATP8B2P98198 1209 aa16.31■□□□□ 0.2
CASC4P1-201ENST00000456608 FAM196AQ6ZSG2 479 aa16.31■□□□□ 0.2
CASC4P1-201ENST00000456608 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
CASC4P1-201ENST00000456608 CCDC87Q9NVE4 849 aa16.31■□□□□ 0.2
CASC4P1-201ENST00000456608 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
CASC4P1-201ENST00000456608 HMMRO75330 724 aa16.3■□□□□ 0.2
CASC4P1-201ENST00000456608 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
CASC4P1-201ENST00000456608 GCKRQ14397 625 aa16.3■□□□□ 0.2
CASC4P1-201ENST00000456608 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
CASC4P1-201ENST00000456608 ZBTB3Q9H5J0 574 aa16.3■□□□□ 0.2
CASC4P1-201ENST00000456608 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
CASC4P1-201ENST00000456608 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
CASC4P1-201ENST00000456608 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
CASC4P1-201ENST00000456608 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
CASC4P1-201ENST00000456608 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
CASC4P1-201ENST00000456608 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
CASC4P1-201ENST00000456608 RXRBP28702 533 aa16.28■□□□□ 0.2
CASC4P1-201ENST00000456608 NUCB1Q02818 461 aa16.28■□□□□ 0.2
CASC4P1-201ENST00000456608 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
CASC4P1-201ENST00000456608 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
CASC4P1-201ENST00000456608 ZNF330Q9Y3S2 320 aaPredicted RBP16.28■□□□□ 0.2
CASC4P1-201ENST00000456608 COL15A1P39059 1388 aa16.28■□□□□ 0.2
CASC4P1-201ENST00000456608 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.2
CASC4P1-201ENST00000456608 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.2
CASC4P1-201ENST00000456608 TCIRG1Q13488 830 aa16.27■□□□□ 0.2
CASC4P1-201ENST00000456608 MTX1Q13505 466 aa16.27■□□□□ 0.2
CASC4P1-201ENST00000456608 SSH3Q8TE77 659 aa16.27■□□□□ 0.2
CASC4P1-201ENST00000456608 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.19
CASC4P1-201ENST00000456608 ERVV-1B6SEH8 477 aa16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 RGS3P49796 1198 aa16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 POLA2Q14181 598 aa16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 GIGYF2Q6Y7W6 1299 aaKnown RBP16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 SUCLG2Q96I99 432 aa16.26■□□□□ 0.19
CASC4P1-201ENST00000456608 H7C1W4 665 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 PDE4AP27815 886 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 CASP7P55210 303 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 CHD1LQ86WJ1 897 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 CWC25Q9NXE8 425 aaPredicted RBP16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
CASC4P1-201ENST00000456608 HLFQ16534 295 aa16.24■□□□□ 0.19
CASC4P1-201ENST00000456608 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
CASC4P1-201ENST00000456608 ANKRD45Q5TZF3 282 aa16.24■□□□□ 0.19
CASC4P1-201ENST00000456608 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
CASC4P1-201ENST00000456608 A0A087WZG4 1122 aa16.23■□□□□ 0.19
CASC4P1-201ENST00000456608 KCNQ4P56696 695 aa16.23■□□□□ 0.19
CASC4P1-201ENST00000456608 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
CASC4P1-201ENST00000456608 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
CASC4P1-201ENST00000456608 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
CASC4P1-201ENST00000456608 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
CASC4P1-201ENST00000456608 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
CASC4P1-201ENST00000456608 LNPKQ9C0E8 428 aa16.22■□□□□ 0.19
CASC4P1-201ENST00000456608 BICC1Q9H694 974 aaKnown RBP16.22■□□□□ 0.19
CASC4P1-201ENST00000456608 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
CASC4P1-201ENST00000456608 MYH3P11055 1940 aa16.22■□□□□ 0.19
CASC4P1-201ENST00000456608 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
CASC4P1-201ENST00000456608 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms