RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LRRCC1Q9C099 1032 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 CRYBG1Q9Y4K1 1723 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 SYCE3A1L190 88 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 MAP4K4O95819 1239 aaPredicted RBP15.12■□□□□ 0.01
LINC00959-201ENST00000456581 IL25Q9H293 177 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 SURF6O75683 361 aaKnown RBP15.11■□□□□ 0.01
LINC00959-201ENST00000456581 UNC5CLQ8IV45 518 aa15.11■□□□□ 0.01
LINC00959-201ENST00000456581 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
LINC00959-201ENST00000456581 LARP6Q9BRS8 491 aaKnown RBP15.11■□□□□ 0.01
LINC00959-201ENST00000456581 UPF3BQ9BZI7 483 aaKnown RBP15.11■□□□□ 0.01
LINC00959-201ENST00000456581 ISY1Q9ULR0 285 aaKnown RBP15.11■□□□□ 0.01
LINC00959-201ENST00000456581 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
LINC00959-201ENST00000456581 SOS2Q07890 1332 aaPredicted RBP15.1■□□□□ 0.01
LINC00959-201ENST00000456581 SIPA1L3O60292 1781 aaPredicted RBP15.1■□□□□ 0.01
LINC00959-201ENST00000456581 ST18O60284 1047 aa15.1■□□□□ 0.01
LINC00959-201ENST00000456581 CLEC17AQ6ZS10 378 aa15.1■□□□□ 0.01
LINC00959-201ENST00000456581 PPP1R9BQ96SB3 815 aa15.1■□□□□ 0.01
LINC00959-201ENST00000456581 IBTKQ9P2D0 1353 aaPredicted RBP15.1■□□□□ 0.01
LINC00959-201ENST00000456581 ERC2O15083 957 aa15.1■□□□□ 0.01
LINC00959-201ENST00000456581 NUCB2P80303 420 aa15.1■□□□□ 0.01
LINC00959-201ENST00000456581 CCDC173Q0VFZ6 552 aa15.1■□□□□ 0.01
LINC00959-201ENST00000456581 TRIM6-TRIM34B2RNG4 842 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 KSR2Q6VAB6 950 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 TMX3Q96JJ7 454 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 R3HCC1Q9Y3T6 440 aaKnown RBP15.09■□□□□ 0.01
LINC00959-201ENST00000456581 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
LINC00959-201ENST00000456581 CASC1Q6TDU7 716 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
LINC00959-201ENST00000456581 PXDNLA1KZ92 1463 aa15.09■□□□□ 0.01
LINC00959-201ENST00000456581 SCN11AQ9UI33 1791 aa15.08■□□□□ 0.01
LINC00959-201ENST00000456581 ANO2Q9NQ90 1003 aa15.08■□□□□ 0.01
LINC00959-201ENST00000456581 DDX21Q9NR30 783 aaKnown RBP eCLIP15.08■□□□□ 0.01
LINC00959-201ENST00000456581 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0.01
LINC00959-201ENST00000456581 PA2G4Q9UQ80 394 aaKnown RBP15.08■□□□□ 0.01
LINC00959-201ENST00000456581 CPDO75976 1380 aa15.08■□□□□ 0.01
LINC00959-201ENST00000456581 MX1P20591 662 aa15.08■□□□□ 0
LINC00959-201ENST00000456581 ZSCAN30Q86W11 494 aa15.08■□□□□ 0
LINC00959-201ENST00000456581 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
LINC00959-201ENST00000456581 DCAF5Q96JK2 942 aa15.08■□□□□ 0
LINC00959-201ENST00000456581 SALL3Q9BXA9 1300 aa15.08■□□□□ 0
LINC00959-201ENST00000456581 OVOS2A0A0G2JMS6 1433 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 CABP4P57796 275 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 COPS6Q7L5N1 327 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 WDR17Q8IZU2 1322 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00959-201ENST00000456581 REC8O95072 547 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 ZNF445P59923 1031 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 POLA2Q14181 598 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 HYPKQ9NX55 129 aa15.07■□□□□ 0
LINC00959-201ENST00000456581 C5P01031 1676 aa15.06■□□□□ 0
LINC00959-201ENST00000456581 IGKV5-2P06315 115 aa15.06■□□□□ 0
LINC00959-201ENST00000456581 ANP32BQ92688 251 aaKnown RBP15.06■□□□□ 0
LINC00959-201ENST00000456581 ADAMTS7Q9UKP4 1686 aa15.06■□□□□ 0
LINC00959-201ENST00000456581 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
LINC00959-201ENST00000456581 TSC1Q92574 1164 aa15.06■□□□□ 0
LINC00959-201ENST00000456581 KAZALD1Q96I82 304 aa15.06■□□□□ 0
LINC00959-201ENST00000456581 N4BP2Q86UW6 1770 aaPredicted RBP15.05■□□□□ 0
LINC00959-201ENST00000456581 ZCRB1Q8TBF4 217 aaKnown RBP15.05■□□□□ 0
LINC00959-201ENST00000456581 RHPN1Q8TCX5 695 aa15.05■□□□□ 0
LINC00959-201ENST00000456581 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.05■□□□□ 0
LINC00959-201ENST00000456581 RRP9O43818 475 aaKnown RBP15.05■□□□□ -0
LINC00959-201ENST00000456581 GADD45BO75293 160 aaPredicted RBP15.05■□□□□ -0
LINC00959-201ENST00000456581 PTMSP20962 102 aa15.05■□□□□ -0
LINC00959-201ENST00000456581 SUCLG2Q96I99 432 aa15.05■□□□□ -0
LINC00959-201ENST00000456581 ESYT1Q9BSJ8 1104 aa15.05■□□□□ -0
LINC00959-201ENST00000456581 OSBPL3Q9H4L5 887 aa15.05■□□□□ -0
LINC00959-201ENST00000456581 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
LINC00959-201ENST00000456581 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
LINC00959-201ENST00000456581 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
LINC00959-201ENST00000456581 KLHDC4Q8TBB5 520 aa15.04■□□□□ -0
LINC00959-201ENST00000456581 ZNF830Q96NB3 372 aaPredicted RBP15.04■□□□□ -0
LINC00959-201ENST00000456581 TCHHQ07283 1943 aa15.04■□□□□ -0
LINC00959-201ENST00000456581 EVA1CP58658 441 aa15.04■□□□□ -0
LINC00959-201ENST00000456581 COL5A2P05997 1499 aaPredicted RBP15.04■□□□□ -0
LINC00959-201ENST00000456581 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
LINC00959-201ENST00000456581 MYD88Q99836 296 aa15.03■□□□□ -0
LINC00959-201ENST00000456581 ATP5J2-PTCD1G3V325 749 aa15.03■□□□□ -0
LINC00959-201ENST00000456581 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
LINC00959-201ENST00000456581 LRP10Q7Z4F1 713 aa15.03■□□□□ -0
LINC00959-201ENST00000456581 C17orf53Q8N3J3 647 aaPredicted RBP15.03■□□□□ -0
LINC00959-201ENST00000456581 OFD1O75665 1012 aa15.02■□□□□ -0
LINC00959-201ENST00000456581 OS9Q13438 667 aaPredicted RBP15.02■□□□□ -0
LINC00959-201ENST00000456581 LINS1Q8NG48 757 aa15.02■□□□□ -0
LINC00959-201ENST00000456581 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
LINC00959-201ENST00000456581 CHMP4AQ9BY43 222 aa15.02■□□□□ -0
LINC00959-201ENST00000456581 BICC1Q9H694 974 aaKnown RBP15.02■□□□□ -0
LINC00959-201ENST00000456581 GRM8O00222 908 aa15.02■□□□□ -0
LINC00959-201ENST00000456581 EPHA10Q5JZY3 1008 aa15.02■□□□□ -0
LINC00959-201ENST00000456581 CWC22Q9HCG8 908 aaKnown RBP15.02■□□□□ -0
LINC00959-201ENST00000456581 FAM177BA6PVY3 158 aa15.02□□□□□ -0.01
LINC00959-201ENST00000456581 CHMLP26374 656 aa15.02□□□□□ -0.01
LINC00959-201ENST00000456581 SIL1Q9H173 461 aa15.02□□□□□ -0.01
LINC00959-201ENST00000456581 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
LINC00959-201ENST00000456581 CPA1P15085 419 aa15.01□□□□□ -0.01
LINC00959-201ENST00000456581 DDX58O95786 925 aaKnown RBP15.01□□□□□ -0.01
LINC00959-201ENST00000456581 IL2RBP14784 551 aa15.01□□□□□ -0.01
LINC00959-201ENST00000456581 NEURL1BA8MQ27 555 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms