RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 EXOC5O00471 708 aa12.31□□□□□ -0.44
PTCHD1-202ENST00000456522 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
PTCHD1-202ENST00000456522 GNAT3A8MTJ3 354 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 PRSS12P56730 875 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 DDB1Q16531 1140 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 LHX6Q9UPM6 363 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
PTCHD1-202ENST00000456522 CYP27B1O15528 508 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 PHKG2P15735 406 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 RBM6P78332 1123 aaKnown RBP12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 POTEAQ6S8J7 498 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 MCM10Q7L590 875 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 PLEKHG2Q9H7P9 1386 aa12.29□□□□□ -0.44
PTCHD1-202ENST00000456522 RXRBP28702 533 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 SEPT12Q8IYM1 358 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 THSD7AQ9UPZ6 1657 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
PTCHD1-202ENST00000456522 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
PTCHD1-202ENST00000456522 CCDC27Q2M243 656 aa12.27□□□□□ -0.45
PTCHD1-202ENST00000456522 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.45
PTCHD1-202ENST00000456522 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
PTCHD1-202ENST00000456522 SNPHO15079 494 aa12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 HSP90AB1P08238 724 aaKnown RBP12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 IL17REQ8NFR9 667 aa12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
PTCHD1-202ENST00000456522 SCN11AQ9UI33 1791 aa12.25□□□□□ -0.45
PTCHD1-202ENST00000456522 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
PTCHD1-202ENST00000456522 RNMTO43148 476 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-202ENST00000456522 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-202ENST00000456522 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
PTCHD1-202ENST00000456522 LAS1LQ9Y4W2 734 aaKnown RBP12.25□□□□□ -0.45
PTCHD1-202ENST00000456522 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
PTCHD1-202ENST00000456522 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
PTCHD1-202ENST00000456522 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
PTCHD1-202ENST00000456522 WDR63Q8IWG1 891 aa12.24□□□□□ -0.45
PTCHD1-202ENST00000456522 DCAF5Q96JK2 942 aa12.24□□□□□ -0.45
PTCHD1-202ENST00000456522 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
PTCHD1-202ENST00000456522 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
PTCHD1-202ENST00000456522 CALD1Q05682 793 aaKnown RBP12.23□□□□□ -0.45
PTCHD1-202ENST00000456522 TEFQ10587 303 aa12.23□□□□□ -0.45
PTCHD1-202ENST00000456522 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
PTCHD1-202ENST00000456522 COL9A1P20849 921 aa12.22□□□□□ -0.45
PTCHD1-202ENST00000456522 CABP4P57796 275 aa12.22□□□□□ -0.45
PTCHD1-202ENST00000456522 FAM198AQ9UFP1 575 aa12.22□□□□□ -0.45
PTCHD1-202ENST00000456522 CEMIPQ8WUJ3 1361 aa12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 TOGARAM1Q9Y4F4 1720 aa12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 RBM46Q8TBY0 533 aaKnown RBP12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
PTCHD1-202ENST00000456522 ITGB4P16144 1822 aa12.21□□□□□ -0.46
PTCHD1-202ENST00000456522 RGS12O14924 1447 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 DOT1LQ8TEK3 1739 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 IL16Q14005 1332 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 E9PSI1 815 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 GNAI1P63096 354 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 SLFN5Q08AF3 891 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
PTCHD1-202ENST00000456522 ERVV-2B6SEH9 535 aa12.19□□□□□ -0.46
PTCHD1-202ENST00000456522 PTPREP23469 700 aa12.19□□□□□ -0.46
PTCHD1-202ENST00000456522 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
PTCHD1-202ENST00000456522 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
PTCHD1-202ENST00000456522 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
PTCHD1-202ENST00000456522 BTBD11A6QL63 1104 aa12.18□□□□□ -0.46
PTCHD1-202ENST00000456522 MBIPQ9NS73 344 aa12.18□□□□□ -0.46
PTCHD1-202ENST00000456522 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
PTCHD1-202ENST00000456522 MRC1P22897 1456 aa12.17□□□□□ -0.46
PTCHD1-202ENST00000456522 CHL1O00533 1208 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms