RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
HIPK3-203ENST00000456517 EHBP1L1Q8N3D4 1523 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 NME9Q86XW9 330 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 FERMT1Q9BQL6 677 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
HIPK3-203ENST00000456517 NF2P35240 595 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 CKAP2LQ8IYA6 745 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 CCDC40Q4G0X9 1142 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 NBPF5PQ86XG9 351 aaPredicted RBP16.78■□□□□ 0.28
HIPK3-203ENST00000456517 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 PRC1O43663 620 aa16.78■□□□□ 0.28
HIPK3-203ENST00000456517 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 SYCE3A1L190 88 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 CASQ1P31415 396 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 NBPF8Q3BBV2 869 aa16.77■□□□□ 0.28
HIPK3-203ENST00000456517 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
HIPK3-203ENST00000456517 GOLIM4O00461 696 aa16.77■□□□□ 0.27
HIPK3-203ENST00000456517 MAP9Q49MG5 647 aa16.77■□□□□ 0.27
HIPK3-203ENST00000456517 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.27
HIPK3-203ENST00000456517 GCOM1H8Y6P7 765 aaPredicted RBP16.76■□□□□ 0.27
HIPK3-203ENST00000456517 MYZAPP0CAP1 466 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 CCDC174Q6PII3 467 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 IFNL2Q8IZJ0 200 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 TTC16Q8NEE8 873 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 BCCIPQ9P287 314 aaKnown RBP eCLIP16.76■□□□□ 0.27
HIPK3-203ENST00000456517 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
HIPK3-203ENST00000456517 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 CPLX3Q8WVH0 158 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 YEATS4O95619 227 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 UBA7P41226 1012 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 TMCO3Q6UWJ1 677 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
HIPK3-203ENST00000456517 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 GSTO1P78417 241 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 HDAC9Q9UKV0 1011 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
HIPK3-203ENST00000456517 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
HIPK3-203ENST00000456517 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
HIPK3-203ENST00000456517 IARSP41252 1262 aaKnown RBP16.74■□□□□ 0.27
HIPK3-203ENST00000456517 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 CRNKL1Q9BZJ0 848 aaKnown RBP16.74■□□□□ 0.27
HIPK3-203ENST00000456517 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 DAPK1P53355 1430 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 UQCRHLA0A096LP55 91 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 UQCRHP07919 91 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 ZNF354CQ86Y25 554 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 NAIPQ13075 1403 aa16.74■□□□□ 0.27
HIPK3-203ENST00000456517 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
HIPK3-203ENST00000456517 LMAN1P49257 510 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 CCDC152Q4G0S7 254 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 KIF2AO00139 706 aaPredicted RBP16.73■□□□□ 0.27
HIPK3-203ENST00000456517 ACTN2P35609 894 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 MICU3Q86XE3 530 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 MCM3P25205 808 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 STX6O43752 255 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 SYNCQ9H7C4 482 aa16.73■□□□□ 0.27
HIPK3-203ENST00000456517 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 TBCAO75347 108 aaKnown RBP16.72■□□□□ 0.27
HIPK3-203ENST00000456517 CTAGE5O15320 804 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 CCDC183Q5T5S1 534 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 SETDB2Q96T68 719 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 URI1O94763 535 aaPredicted RBP16.72■□□□□ 0.27
HIPK3-203ENST00000456517 MCM4P33991 863 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
HIPK3-203ENST00000456517 HAND2P61296 217 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 MMRN2Q9H8L6 949 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 TSNARE1Q96NA8 513 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 FSIP1Q8NA03 581 aa16.72■□□□□ 0.27
HIPK3-203ENST00000456517 SHTN1A0MZ66 631 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 F8W031 263 aaPredicted RBP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 HLTFQ14527 1009 aaKnown RBP eCLIP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 SMC1AQ14683 1233 aaKnown RBP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 WASLO00401 505 aaPredicted RBP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 ALS2CR12Q96Q35 445 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 BRPF3Q9ULD4 1205 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 LIMCH1Q9UPQ0 1083 aa16.71■□□□□ 0.27
HIPK3-203ENST00000456517 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
HIPK3-203ENST00000456517 CD109Q6YHK3 1445 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms