RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 PI4K2BQ8TCG2 481 aa22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 RTF1Q92541 710 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 FEZ1Q99689 392 aa22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 MIS18AQ9NYP9 233 aa22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 MTMR6Q9Y217 621 aa22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 LRRFIP2Q9Y608 721 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 ACEP12821 1306 aa22.59■■□□□ 1.21
SEMA3B-208ENST00000456210 SSH3Q8TE77 659 aa22.58■■□□□ 1.21
SEMA3B-208ENST00000456210 NUTM2FA1L443 756 aa22.58■■□□□ 1.2
SEMA3B-208ENST00000456210 RASEFQ8IZ41 740 aa22.57■■□□□ 1.2
SEMA3B-208ENST00000456210 PLCB2Q00722 1185 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 DNM1Q05193 864 aaKnown RBP22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 USP31Q70CQ4 1352 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 C14orf37Q86TY3 774 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 FAM200AQ8TCP9 573 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 USP6P35125 1406 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 TMEM94Q12767 1356 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 CCDC30Q5VVM6 783 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
SEMA3B-208ENST00000456210 KDRP35968 1356 aa22.55■■□□□ 1.2
SEMA3B-208ENST00000456210 PODXL2Q9NZ53 605 aa22.55■■□□□ 1.2
SEMA3B-208ENST00000456210 GJB2P29033 226 aa22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 ZSCAN31Q96LW9 406 aaPredicted RBP22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 SH2B1Q9NRF2 756 aaPredicted RBP22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 LARGE1O95461 756 aa22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 MTHFSDQ2M296 383 aaKnown RBP22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 HSP90AB2PQ58FF8 381 aa22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 CNTROBQ8N137 903 aa22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 SPC24Q8NBT2 197 aa22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 IL1RAPL2Q9NP60 686 aa22.54■■□□□ 1.2
SEMA3B-208ENST00000456210 MAP3K19Q56UN5 1328 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 CCDC171Q6TFL3 1326 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 PDIA4P13667 645 aaKnown RBP22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 U2AF2P26368 475 aaKnown RBP eCLIP22.53■■□□□ 1.21e-14■□□□□ 8.7
SEMA3B-208ENST00000456210 POLA2Q14181 598 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 VPS53Q5VIR6 699 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 NUTM1Q86Y26 1132 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 MAP3K5Q99683 1374 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 ELP1O95163 1332 aa22.53■■□□□ 1.2
SEMA3B-208ENST00000456210 USP42Q9H9J4 1324 aaKnown RBP22.52■■□□□ 1.2
SEMA3B-208ENST00000456210 KCNB2Q92953 911 aa22.52■■□□□ 1.2
SEMA3B-208ENST00000456210 TM6SF1Q9BZW5 370 aa22.52■■□□□ 1.2
SEMA3B-208ENST00000456210 SPDYE4A6NLX3 237 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 FOXO3O43524 673 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 UBTFL1P0CB47 393 aaPredicted RBP22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 PTGS1P23219 599 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 NCBP1Q09161 790 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 MRVI1Q9Y6F6 885 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 SMTNL1A8MU46 457 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 HTATSF1O43719 755 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 CASTP20810 708 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 MAP3K11Q16584 847 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 CCDC83Q8IWF9 413 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 RHPN1Q8TCX5 695 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 OGFRQ9NZT2 677 aa22.51■■□□□ 1.19
SEMA3B-208ENST00000456210 TPRNQ4KMQ1 711 aa22.5■■□□□ 1.19
SEMA3B-208ENST00000456210 LTBP4Q8N2S1 1624 aa22.5■■□□□ 1.19
SEMA3B-208ENST00000456210 TYRO3Q06418 890 aa22.5■■□□□ 1.19
SEMA3B-208ENST00000456210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.5■■□□□ 1.19
SEMA3B-208ENST00000456210 KIF1BPQ96EK5 621 aa22.5■■□□□ 1.19
SEMA3B-208ENST00000456210 NUP62CLQ9H1M0 184 aa22.5■■□□□ 1.19
SEMA3B-208ENST00000456210 ANKARQ7Z5J8 1434 aa22.49■■□□□ 1.19
SEMA3B-208ENST00000456210 MAP4K4O95819 1239 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-208ENST00000456210 ST3GAL1Q11201 340 aa22.49■■□□□ 1.19
SEMA3B-208ENST00000456210 LARP6Q9BRS8 491 aaKnown RBP22.49■■□□□ 1.19
SEMA3B-208ENST00000456210 ZSWIM6Q9HCJ5 1215 aa22.49■■□□□ 1.19
SEMA3B-208ENST00000456210 ADGRL3Q9HAR2 1447 aa22.49■■□□□ 1.19
SEMA3B-208ENST00000456210 PDRG1Q9NUG6 133 aa22.48■■□□□ 1.19
SEMA3B-208ENST00000456210 TTC21AQ8NDW8 1320 aa22.48■■□□□ 1.19
SEMA3B-208ENST00000456210 RGPD8O14715 1765 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-208ENST00000456210 KRT85P78386 507 aa22.48■■□□□ 1.19
SEMA3B-208ENST00000456210 TTC6Q86TZ1 520 aa22.48■■□□□ 1.19
SEMA3B-208ENST00000456210 SURF6O75683 361 aaKnown RBP22.47■■□□□ 1.19
SEMA3B-208ENST00000456210 RBM43Q6ZSC3 357 aaKnown RBP22.47■■□□□ 1.19
SEMA3B-208ENST00000456210 PPP1R42Q7Z4L9 355 aa22.47■■□□□ 1.19
SEMA3B-208ENST00000456210 TTC41PQ6P2S7 1318 aa22.47■■□□□ 1.19
SEMA3B-208ENST00000456210 PLA2G4DQ86XP0 818 aa22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 CTNNA3Q9UI47 895 aa22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 CPA1P15085 419 aa22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 CWC27Q6UX04 472 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 RUFY2Q8WXA3 655 aa22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 PAXBP1Q9Y5B6 917 aa22.46■■□□□ 1.19
SEMA3B-208ENST00000456210 CCDC186Q7Z3E2 898 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 CGNQ9P2M7 1197 aaKnown RBP22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 CYP46A1Q9Y6A2 500 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 VPS37CA5D8V6 355 aaPredicted RBP22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 GABPB1Q06547 395 aaPredicted RBP22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 LUZP1Q86V48 1076 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 TDRD7Q8NHU6 1098 aaKnown RBP22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 JAKMIP1Q96N16 626 aaKnown RBP22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 CBX8Q9HC52 389 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 BABAM1Q9NWV8 329 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
SEMA3B-208ENST00000456210 SBNO1A3KN83 1393 aa22.44■■□□□ 1.18
SEMA3B-208ENST00000456210 FLT4P35916 1363 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms