RNA–Protein interactions for RNA: ENST00000455987.5

SYCP1-203, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best)

Gene SYCP1, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-203ENST00000455987 FAM161AQ3B820 660 aa8□□□□□ -1.13
SYCP1-203ENST00000455987 TTC5Q8N0Z6 440 aa8□□□□□ -1.13
SYCP1-203ENST00000455987 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
SYCP1-203ENST00000455987 TEX13AQ9BXU3 409 aaPredicted RBP8□□□□□ -1.13
SYCP1-203ENST00000455987 TBC1D2BQ9UPU7 963 aa8□□□□□ -1.13
SYCP1-203ENST00000455987 PDE4DIPQ5VU43 2346 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 HEG1Q9ULI3 1381 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 ST5P78524 1137 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 MAP2K1Q02750 393 aaPredicted RBP7.99□□□□□ -1.13
SYCP1-203ENST00000455987 MTHFSDQ2M296 383 aaKnown RBP7.99□□□□□ -1.13
SYCP1-203ENST00000455987 DEFB115Q30KQ5 88 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 CCDC93Q567U6 631 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 SETDB2Q96T68 719 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 HACL1Q9UJ83 578 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 TIMELESSQ9UNS1 1208 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 CAMTA2O94983 1202 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 PNMA8AQ86V59 439 aaPredicted RBP7.99□□□□□ -1.13
SYCP1-203ENST00000455987 ZNF496Q96IT1 587 aaPredicted RBP7.99□□□□□ -1.13
SYCP1-203ENST00000455987 ZNF541Q9H0D2 1346 aa7.99□□□□□ -1.13
SYCP1-203ENST00000455987 EPHX2P34913 555 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 EAPPQ56P03 285 aaPredicted RBP7.98□□□□□ -1.13
SYCP1-203ENST00000455987 PCDH10Q9P2E7 1040 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 WDR33Q9C0J8 1336 aaKnown RBP7.98□□□□□ -1.13
SYCP1-203ENST00000455987 NPHP1O15259 732 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 HMOX1P09601 288 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 RGS19P49795 217 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYCP1-203ENST00000455987 CNTROBQ8N137 903 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 CLEC11AQ9Y240 323 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
SYCP1-203ENST00000455987 ZNF790Q6PG37 636 aa7.97□□□□□ -1.13
SYCP1-203ENST00000455987 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
SYCP1-203ENST00000455987 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
SYCP1-203ENST00000455987 KLRG2A4D1S0 409 aaPredicted RBP7.97□□□□□ -1.13
SYCP1-203ENST00000455987 NPR1P16066 1061 aa7.97□□□□□ -1.13
SYCP1-203ENST00000455987 MLLT1Q03111 559 aaPredicted RBP7.97□□□□□ -1.13
SYCP1-203ENST00000455987 MAP1SQ66K74 1059 aaPredicted RBP7.97□□□□□ -1.13
SYCP1-203ENST00000455987 FZD9O00144 591 aa7.96□□□□□ -1.13
SYCP1-203ENST00000455987 RTKN2Q8IZC4 609 aa7.96□□□□□ -1.13
SYCP1-203ENST00000455987 GPC2Q8N158 579 aa7.96□□□□□ -1.13
SYCP1-203ENST00000455987 ZNF277Q9NRM2 450 aaPredicted RBP7.96□□□□□ -1.13
SYCP1-203ENST00000455987 KNSTRNQ9Y448 316 aa7.96□□□□□ -1.13
SYCP1-203ENST00000455987 RNF123Q5XPI4 1314 aa7.96□□□□□ -1.13
SYCP1-203ENST00000455987 A1BGP04217 495 aa7.96□□□□□ -1.14
SYCP1-203ENST00000455987 TEFQ10587 303 aa7.96□□□□□ -1.14
SYCP1-203ENST00000455987 CLEC4GQ6UXB4 293 aa7.96□□□□□ -1.14
SYCP1-203ENST00000455987 NBPF5PQ86XG9 351 aaPredicted RBP7.96□□□□□ -1.14
SYCP1-203ENST00000455987 DZIP3Q86Y13 1208 aaKnown RBP7.96□□□□□ -1.14
SYCP1-203ENST00000455987 FMNL2Q96PY5 1086 aa7.96□□□□□ -1.14
SYCP1-203ENST00000455987 ABT1Q9ULW3 272 aaKnown RBP7.96□□□□□ -1.14
SYCP1-203ENST00000455987 IARSP41252 1262 aaKnown RBP7.95□□□□□ -1.14
SYCP1-203ENST00000455987 AMER1Q5JTC6 1135 aaPredicted RBP7.95□□□□□ -1.14
SYCP1-203ENST00000455987 IL17REQ8NFR9 667 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 DDX21Q9NR30 783 aaKnown RBP eCLIP7.95□□□□□ -1.14
SYCP1-203ENST00000455987 SNED1Q8TER0 1413 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 RGL2O15211 777 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 ECE1P42892 770 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 EIF4G2P78344 907 aaKnown RBP eCLIP7.95□□□□□ -1.14
SYCP1-203ENST00000455987 CAPNS2Q96L46 248 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 BEGAINQ9BUH8 593 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 LTBP1Q14766 1721 aa7.95□□□□□ -1.14
SYCP1-203ENST00000455987 CCDC85CA6NKD9 419 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 GNAT3A8MTJ3 354 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 DIAPH1O60610 1272 aaKnown RBP7.94□□□□□ -1.14
SYCP1-203ENST00000455987 ZNF652Q9Y2D9 606 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 CASP8AP2Q9UKL3 1982 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 CEMIPQ8WUJ3 1361 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 HSPA5P11021 654 aaKnown RBP7.94□□□□□ -1.14
SYCP1-203ENST00000455987 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 TPTE2Q6XPS3 522 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 GAS2L2Q8NHY3 880 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 PSMD1Q99460 953 aa7.94□□□□□ -1.14
SYCP1-203ENST00000455987 ALDH1B1P30837 517 aa7.93□□□□□ -1.14
SYCP1-203ENST00000455987 SYNE4Q8N205 404 aa7.93□□□□□ -1.14
SYCP1-203ENST00000455987 JDP2Q8WYK2 163 aa7.93□□□□□ -1.14
SYCP1-203ENST00000455987 GPR101Q96P66 508 aaPredicted RBP7.93□□□□□ -1.14
SYCP1-203ENST00000455987 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
SYCP1-203ENST00000455987 COL4A5P29400 1685 aa7.93□□□□□ -1.14
SYCP1-203ENST00000455987 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
SYCP1-203ENST00000455987 MAP2K2P36507 400 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 EIF6P56537 245 aaKnown RBP7.92□□□□□ -1.14
SYCP1-203ENST00000455987 CC2D2BQ6DHV5 1058 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 CYP4F22Q6NT55 531 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 KCNQ3O43525 872 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 SCNN1DP51172 638 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 PAXIP1Q6ZW49 1069 aaPredicted RBP7.92□□□□□ -1.14
SYCP1-203ENST00000455987 NIP7Q9Y221 180 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYCP1-203ENST00000455987 USP16Q9Y5T5 823 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 TLL2Q9Y6L7 1015 aa7.92□□□□□ -1.14
SYCP1-203ENST00000455987 CA12O43570 354 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 CRY2Q49AN0 593 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 CST9Q5W186 159 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 USP50Q70EL3 339 aaPredicted RBP7.91□□□□□ -1.14
SYCP1-203ENST00000455987 GJA3Q9Y6H8 435 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 CLSPNQ9HAW4 1339 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
SYCP1-203ENST00000455987 NUP98P52948 1817 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 BTBD11A6QL63 1104 aa7.91□□□□□ -1.14
SYCP1-203ENST00000455987 PIP4K2AP48426 406 aaPredicted RBP7.91□□□□□ -1.14
SYCP1-203ENST00000455987 FMR1Q06787 632 aaKnown RBP eCLIP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms