RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FLIIQ13045 1269 aa18.28■□□□□ 0.52
HMGXB4-204ENST00000455359 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
HMGXB4-204ENST00000455359 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
HMGXB4-204ENST00000455359 MRPL50Q8N5N7 158 aaKnown RBP18.28■□□□□ 0.52
HMGXB4-204ENST00000455359 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
HMGXB4-204ENST00000455359 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
HMGXB4-204ENST00000455359 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
HMGXB4-204ENST00000455359 GIGYF2Q6Y7W6 1299 aaKnown RBP18.27■□□□□ 0.52
HMGXB4-204ENST00000455359 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
HMGXB4-204ENST00000455359 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
HMGXB4-204ENST00000455359 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
HMGXB4-204ENST00000455359 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
HMGXB4-204ENST00000455359 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
HMGXB4-204ENST00000455359 PTPRCP08575 1304 aa18.26■□□□□ 0.51
HMGXB4-204ENST00000455359 ZBTB7AO95365 584 aa18.25■□□□□ 0.51
HMGXB4-204ENST00000455359 POLD1P28340 1107 aa18.25■□□□□ 0.51
HMGXB4-204ENST00000455359 FKBP8Q14318 412 aa18.25■□□□□ 0.51
HMGXB4-204ENST00000455359 RIC3Q7Z5B4 369 aa18.25■□□□□ 0.51
HMGXB4-204ENST00000455359 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
HMGXB4-204ENST00000455359 TM4SF1P30408 202 aa18.24■□□□□ 0.51
HMGXB4-204ENST00000455359 FKBP5Q13451 457 aaPredicted RBP18.24■□□□□ 0.51
HMGXB4-204ENST00000455359 G2E3Q7L622 706 aa18.24■□□□□ 0.51
HMGXB4-204ENST00000455359 ARHGAP45Q92619 1136 aa18.24■□□□□ 0.51
HMGXB4-204ENST00000455359 KIF16BQ96L93 1317 aa18.24■□□□□ 0.51
HMGXB4-204ENST00000455359 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
HMGXB4-204ENST00000455359 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 HLFQ16534 295 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 SETDB2Q96T68 719 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 CASZ1Q86V15 1759 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 PI4KAP2A4QPH2 592 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 NFIXQ14938 502 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 PARP10Q53GL7 1025 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 PI4KAP1Q8N8J0 262 aa18.23■□□□□ 0.51
HMGXB4-204ENST00000455359 MMP10P09238 476 aa18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 ZNF34Q8IZ26 560 aa18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 RCAN3Q9UKA8 241 aa18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 ATF5Q9Y2D1 282 aaPredicted RBP18.22■□□□□ 0.51
HMGXB4-204ENST00000455359 PTGER2P43116 358 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 NEXNQ0ZGT2 675 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 TBC1D9BQ66K14 1250 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 MAP3K2Q9Y2U5 619 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 PARP3Q9Y6F1 533 aa18.21■□□□□ 0.51
HMGXB4-204ENST00000455359 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.5
HMGXB4-204ENST00000455359 ADCY9O60503 1353 aa18.2■□□□□ 0.5
HMGXB4-204ENST00000455359 CARMIL3Q8ND23 1372 aa18.2■□□□□ 0.5
HMGXB4-204ENST00000455359 ISCA1Q9BUE6 129 aa18.2■□□□□ 0.5
HMGXB4-204ENST00000455359 NOB1Q9ULX3 412 aaKnown RBP18.2■□□□□ 0.5
HMGXB4-204ENST00000455359 POLRMTO00411 1230 aaKnown RBP18.19■□□□□ 0.5
HMGXB4-204ENST00000455359 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
HMGXB4-204ENST00000455359 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
HMGXB4-204ENST00000455359 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 BCAR3O75815 825 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 DDR1Q08345 913 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 PPP1R42Q7Z4L9 355 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 CCDC191Q8NCU4 936 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
HMGXB4-204ENST00000455359 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
HMGXB4-204ENST00000455359 ZKSCAN2Q63HK3 967 aa18.17■□□□□ 0.5
HMGXB4-204ENST00000455359 BICDL1Q6ZP65 573 aa18.17■□□□□ 0.5
HMGXB4-204ENST00000455359 SERPINB2P05120 415 aa18.16■□□□□ 0.5
HMGXB4-204ENST00000455359 GPTP24298 496 aa18.16■□□□□ 0.5
HMGXB4-204ENST00000455359 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
HMGXB4-204ENST00000455359 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
HMGXB4-204ENST00000455359 MYD88Q99836 296 aa18.16■□□□□ 0.5
HMGXB4-204ENST00000455359 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
HMGXB4-204ENST00000455359 ALDH1L1O75891 902 aa18.15■□□□□ 0.5
HMGXB4-204ENST00000455359 ATF7IPQ6VMQ6 1270 aa18.15■□□□□ 0.5
HMGXB4-204ENST00000455359 UTP14AQ9BVJ6 771 aaKnown RBP18.15■□□□□ 0.5
HMGXB4-204ENST00000455359 UBN2Q6ZU65 1347 aa18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 F6X3S4 739 aa18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 MS4A1P11836 297 aa18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 HSP90B1P14625 803 aaKnown RBP18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 CNBD1Q8NA66 436 aa18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 CWC25Q9NXE8 425 aaPredicted RBP18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
HMGXB4-204ENST00000455359 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 IGKV5-2P06315 115 aa18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 SUSD4Q5VX71 490 aa18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 SRCIN1Q9C0H9 1055 aa18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 CD2APQ9Y5K6 639 aa18.13■□□□□ 0.49
HMGXB4-204ENST00000455359 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
HMGXB4-204ENST00000455359 NTSR2O95665 410 aa18.12■□□□□ 0.49
HMGXB4-204ENST00000455359 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
HMGXB4-204ENST00000455359 ST5P78524 1137 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms