RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 MAP7D1Q3KQU3 841 aa10.1□□□□□ -0.79
LSMEM1-203ENST00000455302 RNF135Q8IUD6 432 aa10.1□□□□□ -0.79
LSMEM1-203ENST00000455302 LRP5O75197 1615 aa10.1□□□□□ -0.79
LSMEM1-203ENST00000455302 NPHP3Q7Z494 1330 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 NRXN3Q9Y4C0 1643 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 TMEM88BA6NKF7 163 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 UNC5CLQ8IV45 518 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 RALGAPBQ86X10 1494 aa10.09□□□□□ -0.79
LSMEM1-203ENST00000455302 NALCNQ8IZF0 1738 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 XPCQ01831 940 aaPredicted RBP10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 ADAM32Q8TC27 787 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 UNC93B1Q9H1C4 597 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 MKRN1Q9UHC7 482 aaKnown RBP10.08□□□□□ -0.8
LSMEM1-203ENST00000455302 LAMC1P11047 1609 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 E9PCH4 1651 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 NUP155O75694 1391 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 BAG6P46379 1132 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 MTRQ99707 1265 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 SLC6A16Q9GZN6 736 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 PRDM9Q9NQV7 894 aa10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 COL22A1Q8NFW1 1626 aaPredicted RBP10.07□□□□□ -0.8
LSMEM1-203ENST00000455302 ROBO2Q9HCK4 1378 aa10.06□□□□□ -0.8
LSMEM1-203ENST00000455302 A0A0G2JS52 829 aa10.06□□□□□ -0.8
LSMEM1-203ENST00000455302 FOXO3O43524 673 aa10.06□□□□□ -0.8
LSMEM1-203ENST00000455302 MYT1Q01538 1121 aa10.06□□□□□ -0.8
LSMEM1-203ENST00000455302 DZIP3Q86Y13 1208 aaKnown RBP10.06□□□□□ -0.8
LSMEM1-203ENST00000455302 NOVA2Q9UNW9 492 aaKnown RBP10.06□□□□□ -0.8
LSMEM1-203ENST00000455302 LOC105371045A0A1W2PR82 267 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 YY1P25490 414 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 MFAP1P55081 439 aaKnown RBP10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 EML3Q32P44 896 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 PHTF2Q8N3S3 785 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 PLPP7Q8NBV4 271 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 FAM174AQ8TBP5 190 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 GLI3P10071 1580 aa10.05□□□□□ -0.8
LSMEM1-203ENST00000455302 IQGAP3Q86VI3 1631 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 LRPPRCP42704 1394 aaKnown RBP10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 RASA1P20936 1047 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 SH3BP5LQ7L8J4 393 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 BPHLQ86WA6 291 aaPredicted RBP10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 DEPDC4Q8N2C3 294 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 PXDNQ92626 1479 aa10.04□□□□□ -0.8
LSMEM1-203ENST00000455302 SLIT2O94813 1529 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 HFM1A2PYH4 1435 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 CARNS1A5YM72 827 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 TLL1O43897 1013 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 NCOA4Q13772 614 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 R3HDM1Q15032 1099 aaKnown RBP10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 RNF20Q5VTR2 975 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
LSMEM1-203ENST00000455302 USP17L15C9J2P7 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L10C9JJH3 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L13C9JLJ4 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L11C9JVI0 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L21D6R901 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L18D6R9N7 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L22D6RA61 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L17D6RBQ6 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L19D6RCP7 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L20D6RJB6 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 USP17L24Q0WX57 530 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 AGERQ15109 404 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 VPS72Q15906 364 aa10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
LSMEM1-203ENST00000455302 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
LSMEM1-203ENST00000455302 TMEM164Q5U3C3 297 aa10.01□□□□□ -0.81
LSMEM1-203ENST00000455302 CCER1Q8TC90 406 aaPredicted RBP10.01□□□□□ -0.81
LSMEM1-203ENST00000455302 NOD1Q9Y239 953 aa10.01□□□□□ -0.81
LSMEM1-203ENST00000455302 IVNS1ABPQ9Y6Y0 642 aa10.01□□□□□ -0.81
LSMEM1-203ENST00000455302 NEXMIFQ5QGS0 1516 aa10.01□□□□□ -0.81
LSMEM1-203ENST00000455302 SPHKAPQ2M3C7 1700 aa10□□□□□ -0.81
LSMEM1-203ENST00000455302 TNKS1BP1Q9C0C2 1729 aaKnown RBP10□□□□□ -0.81
LSMEM1-203ENST00000455302 PTPN5P54829 565 aa10□□□□□ -0.81
LSMEM1-203ENST00000455302 PTK7Q13308 1070 aa10□□□□□ -0.81
LSMEM1-203ENST00000455302 ZMIZ1Q9ULJ6 1067 aa10□□□□□ -0.81
LSMEM1-203ENST00000455302 GNEQ9Y223 722 aaKnown RBP10□□□□□ -0.81
LSMEM1-203ENST00000455302 SPATA31A3Q5VYP0 1347 aa10□□□□□ -0.81
LSMEM1-203ENST00000455302 ROCK1Q13464 1354 aa10□□□□□ -0.81
LSMEM1-203ENST00000455302 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
LSMEM1-203ENST00000455302 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
LSMEM1-203ENST00000455302 STK32AQ8WU08 396 aa9.99□□□□□ -0.81
LSMEM1-203ENST00000455302 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
LSMEM1-203ENST00000455302 CARD14Q9BXL6 1004 aa9.99□□□□□ -0.81
LSMEM1-203ENST00000455302 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
LSMEM1-203ENST00000455302 CDC42BPGQ6DT37 1551 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms