RNA–Protein interactions for RNA: ENST00000454592.5

PHTF2-209, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best)

Gene PHTF2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-209ENST00000454592 CAMK2BQ13554 666 aa9.46□□□□□ -0.9
PHTF2-209ENST00000454592 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
PHTF2-209ENST00000454592 SLC16A10Q8TF71 515 aa9.46□□□□□ -0.9
PHTF2-209ENST00000454592 RTF1Q92541 710 aaKnown RBP9.46□□□□□ -0.9
PHTF2-209ENST00000454592 PDGFDQ9GZP0 370 aaPredicted RBP9.46□□□□□ -0.9
PHTF2-209ENST00000454592 TFCP2L1Q9NZI6 479 aa9.46□□□□□ -0.9
PHTF2-209ENST00000454592 ADAMTS8Q9UP79 889 aa9.46□□□□□ -0.9
PHTF2-209ENST00000454592 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
PHTF2-209ENST00000454592 CNTNAP4Q9C0A0 1308 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 MAPK8IP3Q9UPT6 1336 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 KCPQ6ZWJ8 1503 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 MMRN1Q13201 1228 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 SLC39A6Q13433 755 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
PHTF2-209ENST00000454592 CCDC184Q52MB2 194 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 ZNF790Q6PG37 636 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 C5P01031 1676 aa9.45□□□□□ -0.9
PHTF2-209ENST00000454592 C4BP0C0L5 1744 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 TAF1LQ8IZX4 1826 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 PTCD1O75127 700 aaKnown RBP9.44□□□□□ -0.9
PHTF2-209ENST00000454592 SSFA2P28290 1259 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 TMPOP42166 694 aaKnown RBP9.44□□□□□ -0.9
PHTF2-209ENST00000454592 MCM10Q7L590 875 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 FLAD1Q8NFF5 587 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 RUNDC1Q96C34 613 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 MTFR1LQ9H019 292 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 EMILIN3Q9NT22 766 aa9.44□□□□□ -0.9
PHTF2-209ENST00000454592 PTGER2P43116 358 aa9.43□□□□□ -0.9
PHTF2-209ENST00000454592 DCTN1Q14203 1278 aa9.43□□□□□ -0.9
PHTF2-209ENST00000454592 AMIGO3Q86WK7 504 aa9.43□□□□□ -0.9
PHTF2-209ENST00000454592 COL23A1Q86Y22 540 aaPredicted RBP9.43□□□□□ -0.9
PHTF2-209ENST00000454592 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
PHTF2-209ENST00000454592 AK7Q96M32 723 aa9.43□□□□□ -0.9
PHTF2-209ENST00000454592 SIPA1L3O60292 1781 aaPredicted RBP9.43□□□□□ -0.9
PHTF2-209ENST00000454592 BTBD11A6QL63 1104 aa9.42□□□□□ -0.9
PHTF2-209ENST00000454592 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
PHTF2-209ENST00000454592 RPS6KA4O75676 772 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 ZBTB7AO95365 584 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 CRKLP46109 303 aaKnown RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 RIPK4P57078 832 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 LMOD3Q0VAK6 560 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 NBR1Q14596 966 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 TTC5Q8N0Z6 440 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 ARHGEF1Q92888 912 aaKnown RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 ZNF496Q96IT1 587 aaPredicted RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 UBR2Q8IWV8 1755 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 HEG1Q9ULI3 1381 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 VIRMAQ69YN4 1812 aaKnown RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 GNPATO15228 680 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 KCNQ3O43525 872 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 CYP19A1P11511 503 aaPredicted RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 INTS5Q6P9B9 1019 aaKnown RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 DNAJC10Q8IXB1 793 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 SLAIN1Q8ND83 568 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 FMNL2Q96PY5 1086 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 BABAM1Q9NWV8 329 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 COL5A3P25940 1745 aaPredicted RBP9.41□□□□□ -0.9
PHTF2-209ENST00000454592 TUBGCP6Q96RT7 1819 aa9.41□□□□□ -0.9
PHTF2-209ENST00000454592 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.9
PHTF2-209ENST00000454592 TJP1Q07157 1748 aa9.4□□□□□ -0.9
PHTF2-209ENST00000454592 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
PHTF2-209ENST00000454592 COL24A1Q17RW2 1714 aa9.39□□□□□ -0.91
PHTF2-209ENST00000454592 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
PHTF2-209ENST00000454592 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
PHTF2-209ENST00000454592 CCDC87Q9NVE4 849 aa9.39□□□□□ -0.91
PHTF2-209ENST00000454592 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
PHTF2-209ENST00000454592 MYH14Q7Z406 1995 aaKnown RBP9.39□□□□□ -0.91
PHTF2-209ENST00000454592 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
PHTF2-209ENST00000454592 DPYSL4O14531 572 aa9.38□□□□□ -0.91
PHTF2-209ENST00000454592 APAF1O14727 1248 aa9.38□□□□□ -0.91
PHTF2-209ENST00000454592 STARD3NLO95772 234 aa9.38□□□□□ -0.91
PHTF2-209ENST00000454592 SNRPA1P09661 255 aaKnown RBP9.38□□□□□ -0.91
PHTF2-209ENST00000454592 TRAPPC3LQ5T215 181 aa9.38□□□□□ -0.91
PHTF2-209ENST00000454592 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
PHTF2-209ENST00000454592 PHF14O94880 888 aa9.37□□□□□ -0.91
PHTF2-209ENST00000454592 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
PHTF2-209ENST00000454592 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
PHTF2-209ENST00000454592 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
PHTF2-209ENST00000454592 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
PHTF2-209ENST00000454592 CHL1O00533 1208 aa9.37□□□□□ -0.91
PHTF2-209ENST00000454592 EIF5P55010 431 aaKnown RBP9.37□□□□□ -0.91
PHTF2-209ENST00000454592 CCDC27Q2M243 656 aa9.37□□□□□ -0.91
PHTF2-209ENST00000454592 MIS18AQ9NYP9 233 aa9.37□□□□□ -0.91
PHTF2-209ENST00000454592 DAXXQ9UER7 740 aaPredicted RBP9.37□□□□□ -0.91
PHTF2-209ENST00000454592 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
PHTF2-209ENST00000454592 POLD1P28340 1107 aa9.36□□□□□ -0.91
PHTF2-209ENST00000454592 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
PHTF2-209ENST00000454592 ARXQ96QS3 562 aa9.36□□□□□ -0.91
PHTF2-209ENST00000454592 USP16Q9Y5T5 823 aa9.36□□□□□ -0.91
PHTF2-209ENST00000454592 KDM3BQ7LBC6 1761 aa9.35□□□□□ -0.91
PHTF2-209ENST00000454592 PRAMEF22A3QJZ6 481 aa9.35□□□□□ -0.91
PHTF2-209ENST00000454592 CCER2I3L3R5 266 aa9.35□□□□□ -0.91
PHTF2-209ENST00000454592 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
PHTF2-209ENST00000454592 ZNF853P0CG23 659 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 425.7 ms