RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 STYK1Q6J9G0 422 aa34.44■■■■□ 3.1
NEK6-211ENST00000454453 GAS2L2Q8NHY3 880 aa34.44■■■■□ 3.1
NEK6-211ENST00000454453 FMNL2Q96PY5 1086 aa34.44■■■■□ 3.1
NEK6-211ENST00000454453 U2SURPO15042 1029 aaKnown RBP34.43■■■■□ 3.1
NEK6-211ENST00000454453 CNKSR1Q969H4 720 aa34.43■■■■□ 3.1
NEK6-211ENST00000454453 MKRN1Q9UHC7 482 aaKnown RBP34.43■■■■□ 3.1
NEK6-211ENST00000454453 PIP4K2AP48426 406 aaPredicted RBP34.41■■■■□ 3.1
NEK6-211ENST00000454453 C7orf43Q8WVR3 580 aa34.4■■■■□ 3.1
NEK6-211ENST00000454453 MASTLQ96GX5 879 aa34.4■■■■□ 3.1
NEK6-211ENST00000454453 USP16Q9Y5T5 823 aa34.4■■■■□ 3.1
NEK6-211ENST00000454453 ST5P78524 1137 aa34.39■■■■□ 3.1
NEK6-211ENST00000454453 DZIP3Q86Y13 1208 aaKnown RBP34.39■■■■□ 3.1
NEK6-211ENST00000454453 PRAMEF22A3QJZ6 481 aa34.38■■■■□ 3.09
NEK6-211ENST00000454453 PHACTR3Q96KR7 559 aa34.38■■■■□ 3.09
NEK6-211ENST00000454453 PASKQ96RG2 1323 aa34.36■■■■□ 3.09
NEK6-211ENST00000454453 BTBD11A6QL63 1104 aa34.36■■■■□ 3.09
NEK6-211ENST00000454453 NPHP1O15259 732 aa34.35■■■■□ 3.09
NEK6-211ENST00000454453 CNGB1Q14028 1251 aaPredicted RBP34.35■■■■□ 3.09
NEK6-211ENST00000454453 NPC1L1Q9UHC9 1359 aa34.35■■■■□ 3.09
NEK6-211ENST00000454453 SOGA3Q5TF21 947 aa34.34■■■■□ 3.09
NEK6-211ENST00000454453 L3MBTL3Q96JM7 780 aaPredicted RBP34.34■■■■□ 3.09
NEK6-211ENST00000454453 CNTNAP1P78357 1384 aa34.34■■■■□ 3.09
NEK6-211ENST00000454453 SCN4AP35499 1836 aa34.32■■■■□ 3.09
NEK6-211ENST00000454453 NPM2Q86SE8 214 aaKnown RBP34.32■■■■□ 3.08
NEK6-211ENST00000454453 TAF1DQ9H5J8 278 aaPredicted RBP34.32■■■■□ 3.08
NEK6-211ENST00000454453 OLFM4Q6UX06 510 aa34.31■■■■□ 3.08
NEK6-211ENST00000454453 LDHDQ86WU2 507 aa34.31■■■■□ 3.08
NEK6-211ENST00000454453 RSPH6AQ9H0K4 717 aa34.31■■■■□ 3.08
NEK6-211ENST00000454453 KLRG2A4D1S0 409 aaPredicted RBP34.3■■■■□ 3.08
NEK6-211ENST00000454453 FOXN1O15353 648 aa34.3■■■■□ 3.08
NEK6-211ENST00000454453 PRKAR2BP31323 418 aa34.3■■■■□ 3.08
NEK6-211ENST00000454453 CLEC4GQ6UXB4 293 aa34.3■■■■□ 3.08
NEK6-211ENST00000454453 NBPF5PQ86XG9 351 aaPredicted RBP34.3■■■■□ 3.08
NEK6-211ENST00000454453 ZNF541Q9H0D2 1346 aa34.3■■■■□ 3.08
NEK6-211ENST00000454453 IQCA1LA6NCM1 817 aa34.29■■■■□ 3.08
NEK6-211ENST00000454453 CCDC93Q567U6 631 aa34.29■■■■□ 3.08
NEK6-211ENST00000454453 CCER1Q8TC90 406 aaPredicted RBP34.29■■■■□ 3.08
NEK6-211ENST00000454453 ITGBL1O95965 494 aaPredicted RBP34.28■■■■□ 3.08
NEK6-211ENST00000454453 ADAMTSL1Q8N6G6 1762 aa34.28■■■■□ 3.08
NEK6-211ENST00000454453 NPR1P16066 1061 aa34.27■■■■□ 3.08
NEK6-211ENST00000454453 FKBP4Q02790 459 aaKnown RBP eCLIP34.26■■■■□ 3.08
NEK6-211ENST00000454453 ZNF277Q9NRM2 450 aaPredicted RBP34.26■■■■□ 3.08
NEK6-211ENST00000454453 NBPF26B4DH59 902 aa34.25■■■■□ 3.07
NEK6-211ENST00000454453 NBPF10Q6P3W6 841 aaKnown RBP34.25■■■■□ 3.07
NEK6-211ENST00000454453 NBPF15Q8N660 670 aa34.25■■■■□ 3.07
NEK6-211ENST00000454453 VEGFBP49765 207 aa34.24■■■■□ 3.07
NEK6-211ENST00000454453 MCM10Q7L590 875 aa34.23■■■■□ 3.07
NEK6-211ENST00000454453 SNRPA1P09661 255 aaKnown RBP34.22■■■■□ 3.07
NEK6-211ENST00000454453 NIP7Q9Y221 180 aaKnown RBP eCLIP34.22■■■■□ 3.07
NEK6-211ENST00000454453 ZNF652Q9Y2D9 606 aa34.22■■■■□ 3.07
NEK6-211ENST00000454453 EAPPQ56P03 285 aaPredicted RBP34.21■■■■□ 3.07
NEK6-211ENST00000454453 TMEM88BA6NKF7 163 aa34.2■■■■□ 3.07
NEK6-211ENST00000454453 TPTE2Q6XPS3 522 aa34.2■■■■□ 3.07
NEK6-211ENST00000454453 SNED1Q8TER0 1413 aa34.2■■■■□ 3.06
NEK6-211ENST00000454453 FAM177BA6PVY3 158 aa34.19■■■■□ 3.06
NEK6-211ENST00000454453 HLFQ16534 295 aa34.19■■■■□ 3.06
NEK6-211ENST00000454453 PRDM10Q9NQV6 1147 aa34.19■■■■□ 3.06
NEK6-211ENST00000454453 HACL1Q9UJ83 578 aa34.19■■■■□ 3.06
NEK6-211ENST00000454453 DCTN1Q14203 1278 aa34.18■■■■□ 3.06
NEK6-211ENST00000454453 FZD9O00144 591 aa34.17■■■■□ 3.06
NEK6-211ENST00000454453 EPHX2P34913 555 aa34.17■■■■□ 3.06
NEK6-211ENST00000454453 RNF123Q5XPI4 1314 aa34.17■■■■□ 3.06
NEK6-211ENST00000454453 RGL2O15211 777 aa34.16■■■■□ 3.06
NEK6-211ENST00000454453 RTKN2Q8IZC4 609 aa34.16■■■■□ 3.06
NEK6-211ENST00000454453 IARSP41252 1262 aaKnown RBP34.15■■■■□ 3.06
NEK6-211ENST00000454453 COL4A5P29400 1685 aa34.15■■■■□ 3.06
NEK6-211ENST00000454453 SYNE4Q8N205 404 aa34.14■■■■□ 3.06
NEK6-211ENST00000454453 WBP1LQ9NX94 342 aa34.14■■■■□ 3.06
NEK6-211ENST00000454453 MAP1SQ66K74 1059 aaPredicted RBP34.13■■■■□ 3.05
NEK6-211ENST00000454453 CLEC11AQ9Y240 323 aa34.13■■■■□ 3.05
NEK6-211ENST00000454453 CTCFP49711 727 aaPredicted RBP34.12■■■■□ 3.05
NEK6-211ENST00000454453 RTF1Q92541 710 aaKnown RBP34.12■■■■□ 3.05
NEK6-211ENST00000454453 ABCC12Q96J65 1359 aa34.11■■■■□ 3.05
NEK6-211ENST00000454453 CNTROBQ8N137 903 aa34.11■■■■□ 3.05
NEK6-211ENST00000454453 CFAP53Q96M91 514 aa34.11■■■■□ 3.05
NEK6-211ENST00000454453 LTBP1Q14766 1721 aa34.1■■■■□ 3.05
NEK6-211ENST00000454453 RASSF10A6NK89 507 aa34.1■■■■□ 3.05
NEK6-211ENST00000454453 ALDH1B1P30837 517 aa34.1■■■■□ 3.05
NEK6-211ENST00000454453 LAMB4A4D0S4 1761 aa34.09■■■■□ 3.05
NEK6-211ENST00000454453 U2AF1L5P0DN76 240 aaPredicted RBP34.09■■■■□ 3.05
NEK6-211ENST00000454453 U2AF1Q01081 240 aaKnown RBP eCLIP34.09■■■■□ 3.05
NEK6-211ENST00000454453 CRY2Q49AN0 593 aa34.09■■■■□ 3.05
NEK6-211ENST00000454453 PNMA8AQ86V59 439 aaPredicted RBP34.09■■■■□ 3.05
NEK6-211ENST00000454453 AIDAQ96BJ3 306 aa34.09■■■■□ 3.05
NEK6-211ENST00000454453 LBX1P52954 281 aa34.08■■■■□ 3.05
NEK6-211ENST00000454453 SLC51AQ86UW1 340 aa34.08■■■■□ 3.05
NEK6-211ENST00000454453 GPC2Q8N158 579 aa34.08■■■■□ 3.05
NEK6-211ENST00000454453 PSMD1Q99460 953 aa34.08■■■■□ 3.05
NEK6-211ENST00000454453 MIS18AQ9NYP9 233 aa34.08■■■■□ 3.05
NEK6-211ENST00000454453 NUTM1Q86Y26 1132 aa34.07■■■■□ 3.04
NEK6-211ENST00000454453 NUDCQ9Y266 331 aa34.06■■■■□ 3.04
NEK6-211ENST00000454453 HTATSF1O43719 755 aaKnown RBP34.05■■■■□ 3.04
NEK6-211ENST00000454453 DEFB115Q30KQ5 88 aa34.05■■■■□ 3.04
NEK6-211ENST00000454453 PPP2R1AP30153 589 aa34.04■■■■□ 3.04
NEK6-211ENST00000454453 TAF7Q15545 349 aaPredicted RBP34.04■■■■□ 3.04
NEK6-211ENST00000454453 NUP98P52948 1817 aa34.03■■■■□ 3.04
NEK6-211ENST00000454453 GTF2E1P29083 439 aaPredicted RBP34.03■■■■□ 3.04
NEK6-211ENST00000454453 HSPA8P11142 646 aaKnown RBP34.02■■■■□ 3.04
NEK6-211ENST00000454453 FMR1Q06787 632 aaKnown RBP eCLIP34.02■■■■□ 3.04
NEK6-211ENST00000454453 NGEFQ8N5V2 710 aa34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms