RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 SNED1Q8TER0 1413 aa8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 CEMIPQ8WUJ3 1361 aa8.09□□□□□ -1.12
HLA-DPA3-207ENST00000454398 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
HLA-DPA3-207ENST00000454398 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
HLA-DPA3-207ENST00000454398 MCM10Q7L590 875 aa8.08□□□□□ -1.12
HLA-DPA3-207ENST00000454398 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
HLA-DPA3-207ENST00000454398 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
HLA-DPA3-207ENST00000454398 DLG5Q8TDM6 1919 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 GAS2L2Q8NHY3 880 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 C7orf43Q8WVR3 580 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 FMNL2Q96PY5 1086 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 ZNF277Q9NRM2 450 aaPredicted RBP8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 USP16Q9Y5T5 823 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 KDM3BQ7LBC6 1761 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 ADAMTSL1Q8N6G6 1762 aa8.07□□□□□ -1.12
HLA-DPA3-207ENST00000454398 A0A087WZG4 1122 aa8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 SRGNP10124 158 aa8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 PDE6BP35913 854 aa8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 IL6STP40189 918 aaPredicted RBP8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 ST5P78524 1137 aa8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 EAPPQ56P03 285 aaPredicted RBP8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NBPF5PQ86XG9 351 aaPredicted RBP8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
HLA-DPA3-207ENST00000454398 RNF123Q5XPI4 1314 aa8.05□□□□□ -1.12
HLA-DPA3-207ENST00000454398 SLC34A2O95436 690 aa8.05□□□□□ -1.12
HLA-DPA3-207ENST00000454398 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.12
HLA-DPA3-207ENST00000454398 THUMPD2Q9BTF0 503 aaKnown RBP8.05□□□□□ -1.12
HLA-DPA3-207ENST00000454398 MIS18AQ9NYP9 233 aa8.05□□□□□ -1.12
HLA-DPA3-207ENST00000454398 LTBP3Q9NS15 1303 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 SCN4AP35499 1836 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 FOXN1O15353 648 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 U2AF1L5P0DN76 240 aaPredicted RBP8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 U2AF1Q01081 240 aaKnown RBP eCLIP8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 HLFQ16534 295 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 STYK1Q6J9G0 422 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 CHADLQ6NUI6 762 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 C3orf67Q6ZVT6 689 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NUTM1Q86Y26 1132 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NGEFQ8N5V2 710 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NIP7Q9Y221 180 aaKnown RBP eCLIP8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 CNTNAP1P78357 1384 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NPC1L1Q9UHC9 1359 aa8.04□□□□□ -1.12
HLA-DPA3-207ENST00000454398 PASKQ96RG2 1323 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NUP98P52948 1817 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 CCDC93Q567U6 631 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 NPM2Q86SE8 214 aaKnown RBP8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 CNKSR1Q969H4 720 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 ZNF428Q96B54 188 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 MASTLQ96GX5 879 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 TAF1DQ9H5J8 278 aaPredicted RBP8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 CREBZFQ9NS37 354 aa8.03□□□□□ -1.12
HLA-DPA3-207ENST00000454398 COL4A1P02462 1669 aa8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 KLRG2A4D1S0 409 aaPredicted RBP8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TCERG1O14776 1098 aaKnown RBP8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 ITGBL1O95965 494 aaPredicted RBP8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 GPTP24298 496 aa8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 PPP2R1AP30153 589 aa8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 LAMB2P55268 1798 aa8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 UBN2Q6ZU65 1347 aa8.02□□□□□ -1.13
HLA-DPA3-207ENST00000454398 THSD7BQ9C0I4 1608 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 SNRPA1P09661 255 aaKnown RBP8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 NPR1P16066 1061 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 VEGFBP49765 207 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 GRM1Q13255 1194 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TTLL7Q6ZT98 887 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 LDHDQ86WU2 507 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 CFAP53Q96M91 514 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TEX13AQ9BXU3 409 aaPredicted RBP8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 PCDH10Q9P2E7 1040 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 ZNF652Q9Y2D9 606 aa8.01□□□□□ -1.13
HLA-DPA3-207ENST00000454398 MYL6BP14649 208 aa8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 EPHX2P34913 555 aa8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 L3MBTL3Q96JM7 780 aaPredicted RBP8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 CLEC11AQ9Y240 323 aa8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 GJA3Q9Y6H8 435 aa8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TAF1P21675 1872 aa8□□□□□ -1.13
HLA-DPA3-207ENST00000454398 ANKRD36CQ5JPF3 1778 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 IQCA1LA6NCM1 817 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 TRAF5O00463 557 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 ANXA1P04083 346 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 IARSP41252 1262 aaKnown RBP7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 RIC1Q4ADV7 1423 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 SOGA3Q5TF21 947 aa7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
HLA-DPA3-207ENST00000454398 HACL1Q9UJ83 578 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms