RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 RGL2O15211 777 aa24.51■■□□□ 1.51
UBE2D4-208ENST00000454350 NEFMP07197 916 aa24.51■■□□□ 1.51
UBE2D4-208ENST00000454350 CNBD1Q8NA66 436 aa24.51■■□□□ 1.51
UBE2D4-208ENST00000454350 PNISRQ8TF01 805 aaKnown RBP24.51■■□□□ 1.51
UBE2D4-208ENST00000454350 PDZRN3Q9UPQ7 1066 aa24.51■■□□□ 1.51
UBE2D4-208ENST00000454350 TOMM70O94826 608 aa24.49■■□□□ 1.51
UBE2D4-208ENST00000454350 PNNQ9H307 717 aaKnown RBP24.49■■□□□ 1.51
UBE2D4-208ENST00000454350 ZNF622Q969S3 477 aaKnown RBP eCLIP24.48■■□□□ 1.51
UBE2D4-208ENST00000454350 MAPK8IP3Q9UPT6 1336 aa24.48■■□□□ 1.51
UBE2D4-208ENST00000454350 ZC3H4Q9UPT8 1303 aaKnown RBP24.47■■□□□ 1.51
UBE2D4-208ENST00000454350 SRGNP10124 158 aa24.47■■□□□ 1.51
UBE2D4-208ENST00000454350 LMNB1P20700 586 aa24.47■■□□□ 1.51
UBE2D4-208ENST00000454350 HLFQ16534 295 aa24.47■■□□□ 1.51
UBE2D4-208ENST00000454350 ZNF652Q9Y2D9 606 aa24.47■■□□□ 1.51
UBE2D4-208ENST00000454350 MYBBP1AQ9BQG0 1328 aaKnown RBP24.45■■□□□ 1.5
UBE2D4-208ENST00000454350 KLRG2A4D1S0 409 aaPredicted RBP24.45■■□□□ 1.5
UBE2D4-208ENST00000454350 ST5P78524 1137 aa24.45■■□□□ 1.5
UBE2D4-208ENST00000454350 STYK1Q6J9G0 422 aa24.45■■□□□ 1.5
UBE2D4-208ENST00000454350 KDM2BQ8NHM5 1336 aa24.44■■□□□ 1.5
UBE2D4-208ENST00000454350 C21orf2O43822 256 aa24.44■■□□□ 1.5
UBE2D4-208ENST00000454350 NBPF5PQ86XG9 351 aaPredicted RBP24.44■■□□□ 1.5
UBE2D4-208ENST00000454350 NIP7Q9Y221 180 aaKnown RBP eCLIP24.44■■□□□ 1.5
UBE2D4-208ENST00000454350 TMPOP42166 694 aaKnown RBP24.43■■□□□ 1.5
UBE2D4-208ENST00000454350 RIPK4P57078 832 aa24.43■■□□□ 1.5
UBE2D4-208ENST00000454350 TTLL7Q6ZT98 887 aa24.42■■□□□ 1.5
UBE2D4-208ENST00000454350 RBM46Q8TBY0 533 aaKnown RBP24.42■■□□□ 1.5
UBE2D4-208ENST00000454350 MASTLQ96GX5 879 aa24.42■■□□□ 1.5
UBE2D4-208ENST00000454350 RRAGCQ9HB90 399 aa24.42■■□□□ 1.5
UBE2D4-208ENST00000454350 PRPF40BQ6NWY9 871 aaKnown RBP24.41■■□□□ 1.5
UBE2D4-208ENST00000454350 LRP10Q7Z4F1 713 aa24.41■■□□□ 1.5
UBE2D4-208ENST00000454350 C7orf43Q8WVR3 580 aa24.41■■□□□ 1.5
UBE2D4-208ENST00000454350 CNKSR1Q969H4 720 aa24.41■■□□□ 1.5
UBE2D4-208ENST00000454350 ZNF219Q9P2Y4 722 aaPredicted RBP24.41■■□□□ 1.5
UBE2D4-208ENST00000454350 MAP3K15Q6ZN16 1313 aa24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 LTBP3Q9NS15 1303 aa24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 ERVV-1B6SEH8 477 aa24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 NPHP1O15259 732 aa24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 TPTE2Q6XPS3 522 aa24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 RRP7AQ9Y3A4 280 aaKnown RBP24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 WDR90Q96KV7 1748 aa24.4■■□□□ 1.5
UBE2D4-208ENST00000454350 GLTPD2A6NH11 291 aa24.39■■□□□ 1.49
UBE2D4-208ENST00000454350 NGEFQ8N5V2 710 aa24.39■■□□□ 1.49
UBE2D4-208ENST00000454350 TSPYL4Q9UJ04 414 aa24.39■■□□□ 1.49
UBE2D4-208ENST00000454350 PDIA6Q15084 440 aa24.38■■□□□ 1.49
UBE2D4-208ENST00000454350 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
UBE2D4-208ENST00000454350 FAM177BA6PVY3 158 aa24.37■■□□□ 1.49
UBE2D4-208ENST00000454350 MYL6BP14649 208 aa24.37■■□□□ 1.49
UBE2D4-208ENST00000454350 CCDC146Q8IYE0 955 aa24.37■■□□□ 1.49
UBE2D4-208ENST00000454350 BABAM1Q9NWV8 329 aa24.37■■□□□ 1.49
UBE2D4-208ENST00000454350 ABCC12Q96J65 1359 aa24.37■■□□□ 1.49
UBE2D4-208ENST00000454350 NPR1P16066 1061 aa24.36■■□□□ 1.49
UBE2D4-208ENST00000454350 ANKRD36CQ5JPF3 1778 aa24.36■■□□□ 1.49
UBE2D4-208ENST00000454350 UBN2Q6ZU65 1347 aa24.35■■□□□ 1.49
UBE2D4-208ENST00000454350 POTECB2RU33 542 aa24.35■■□□□ 1.49
UBE2D4-208ENST00000454350 APLP1P51693 650 aa24.35■■□□□ 1.49
UBE2D4-208ENST00000454350 TRIM35Q9UPQ4 493 aa24.35■■□□□ 1.49
UBE2D4-208ENST00000454350 DNAJC5GQ8N7S2 189 aa24.34■■□□□ 1.49
UBE2D4-208ENST00000454350 TAOK3Q9H2K8 898 aa24.34■■□□□ 1.49
UBE2D4-208ENST00000454350 IBTKQ9P2D0 1353 aaPredicted RBP24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 LMOD3Q0VAK6 560 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 FSTL1Q12841 308 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 PROSER3Q2NL68 480 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 CRY2Q49AN0 593 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 C16orf71Q8IYS4 520 aaPredicted RBP24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 ZNF34Q8IZ26 560 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 ZBTB3Q9H5J0 574 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 ADAMTS8Q9UP79 889 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 RIC1Q4ADV7 1423 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 SNED1Q8TER0 1413 aa24.33■■□□□ 1.49
UBE2D4-208ENST00000454350 ERFEQ4G0M1 354 aa24.32■■□□□ 1.48
UBE2D4-208ENST00000454350 SOGA3Q5TF21 947 aa24.32■■□□□ 1.48
UBE2D4-208ENST00000454350 OLFM4Q6UX06 510 aa24.32■■□□□ 1.48
UBE2D4-208ENST00000454350 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
UBE2D4-208ENST00000454350 NUTM1Q86Y26 1132 aa24.32■■□□□ 1.48
UBE2D4-208ENST00000454350 RUNDC1Q96C34 613 aa24.32■■□□□ 1.48
UBE2D4-208ENST00000454350 CHL1O00533 1208 aa24.31■■□□□ 1.48
UBE2D4-208ENST00000454350 VEGFAP15692 232 aaPredicted RBP24.31■■□□□ 1.48
UBE2D4-208ENST00000454350 SUSD4Q5VX71 490 aa24.31■■□□□ 1.48
UBE2D4-208ENST00000454350 GIGYF2Q6Y7W6 1299 aaKnown RBP24.31■■□□□ 1.48
UBE2D4-208ENST00000454350 LAMB2P55268 1798 aa24.3■■□□□ 1.48
UBE2D4-208ENST00000454350 ANXA1P04083 346 aa24.3■■□□□ 1.48
UBE2D4-208ENST00000454350 EIF2S2P20042 333 aaKnown RBP24.3■■□□□ 1.48
UBE2D4-208ENST00000454350 GPTP24298 496 aa24.3■■□□□ 1.48
UBE2D4-208ENST00000454350 NEUROD2Q15784 382 aa24.3■■□□□ 1.48
UBE2D4-208ENST00000454350 NYXQ9GZU5 481 aa24.3■■□□□ 1.48
UBE2D4-208ENST00000454350 KRT24Q2M2I5 525 aa24.29■■□□□ 1.48
UBE2D4-208ENST00000454350 CCDC93Q567U6 631 aa24.29■■□□□ 1.48
UBE2D4-208ENST00000454350 NTSR2O95665 410 aa24.28■■□□□ 1.48
UBE2D4-208ENST00000454350 GTF2E1P29083 439 aaPredicted RBP24.27■■□□□ 1.48
UBE2D4-208ENST00000454350 WDR43Q15061 677 aaKnown RBP eCLIP24.27■■□□□ 1.48
UBE2D4-208ENST00000454350 HTRA3P83110 453 aa24.26■■□□□ 1.47
UBE2D4-208ENST00000454350 FKBP4Q02790 459 aaKnown RBP eCLIP24.26■■□□□ 1.47
UBE2D4-208ENST00000454350 DPY19L2Q6NUT2 758 aa24.26■■□□□ 1.47
UBE2D4-208ENST00000454350 SMC1BQ8NDV3 1235 aa24.26■■□□□ 1.47
UBE2D4-208ENST00000454350 SCN4AP35499 1836 aa24.26■■□□□ 1.47
UBE2D4-208ENST00000454350 ALDH1B1P30837 517 aa24.25■■□□□ 1.47
UBE2D4-208ENST00000454350 HOXA10P31260 410 aaPredicted RBP24.25■■□□□ 1.47
UBE2D4-208ENST00000454350 C3orf67Q6ZVT6 689 aa24.25■■□□□ 1.47
UBE2D4-208ENST00000454350 DDNO94850 711 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms