RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 MAP3K11Q16584 847 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 ZNF771Q7L3S4 317 aaPredicted RBP23.36■■□□□ 1.33
LMBR1-213ENST00000454132 CBX8Q9HC52 389 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 ANKRD7Q92527 254 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 TNNT1P13805 278 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 ARID5BQ14865 1188 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 FAM200AQ8TCP9 573 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 EYA1Q99502 592 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 TPCN1Q9ULQ1 816 aa23.36■■□□□ 1.33
LMBR1-213ENST00000454132 GOLGA6L4A6NEF3 574 aa23.35■■□□□ 1.33
LMBR1-213ENST00000454132 TNMDQ9H2S6 317 aa23.35■■□□□ 1.33
LMBR1-213ENST00000454132 FOSBP53539 338 aa23.35■■□□□ 1.33
LMBR1-213ENST00000454132 SSH3Q8TE77 659 aa23.35■■□□□ 1.33
LMBR1-213ENST00000454132 FBXW7Q969H0 707 aa23.35■■□□□ 1.33
LMBR1-213ENST00000454132 GTPBP4Q9BZE4 634 aaKnown RBP23.35■■□□□ 1.33
LMBR1-213ENST00000454132 NPHP1O15259 732 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 AMPHP49418 695 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 CEBPZQ03701 1054 aaKnown RBP23.34■■□□□ 1.33
LMBR1-213ENST00000454132 HDGFL1Q5TGJ6 251 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 PA2G4Q9UQ80 394 aaKnown RBP23.34■■□□□ 1.33
LMBR1-213ENST00000454132 DNAJC25Q9H1X3 360 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 CYP46A1Q9Y6A2 500 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 TAF6LQ9Y6J9 622 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 DIP2CQ9Y2E4 1556 aa23.34■■□□□ 1.33
LMBR1-213ENST00000454132 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
LMBR1-213ENST00000454132 DDX11Q96FC9 970 aa23.33■■□□□ 1.33
LMBR1-213ENST00000454132 TAF7Q15545 349 aaPredicted RBP23.32■■□□□ 1.32
LMBR1-213ENST00000454132 TPD52L1Q16890 204 aaPredicted RBP23.32■■□□□ 1.32
LMBR1-213ENST00000454132 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
LMBR1-213ENST00000454132 PPFIA3O75145 1194 aa23.32■■□□□ 1.32
LMBR1-213ENST00000454132 FAM227BQ96M60 508 aa23.32■■□□□ 1.32
LMBR1-213ENST00000454132 RAB11FIP3O75154 756 aa23.32■■□□□ 1.32
LMBR1-213ENST00000454132 CCDC144BQ3MJ40 725 aa23.32■■□□□ 1.32
LMBR1-213ENST00000454132 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
LMBR1-213ENST00000454132 KRT85P78386 507 aa23.31■■□□□ 1.32
LMBR1-213ENST00000454132 CTIFO43310 598 aaKnown RBP23.31■■□□□ 1.32
LMBR1-213ENST00000454132 CACTINQ8WUQ7 758 aaKnown RBP23.31■■□□□ 1.32
LMBR1-213ENST00000454132 KIF1BPQ96EK5 621 aa23.31■■□□□ 1.32
LMBR1-213ENST00000454132 ZSCAN25Q6NSZ9 544 aa23.3■■□□□ 1.32
LMBR1-213ENST00000454132 IL17REQ8NFR9 667 aa23.3■■□□□ 1.32
LMBR1-213ENST00000454132 NR1I2O75469 434 aa23.3■■□□□ 1.32
LMBR1-213ENST00000454132 CGNQ9P2M7 1197 aaKnown RBP23.3■■□□□ 1.32
LMBR1-213ENST00000454132 USP27XA6NNY8 438 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 ZBTB22O15209 634 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 LARP1Q6PKG0 1096 aaKnown RBP23.29■■□□□ 1.32
LMBR1-213ENST00000454132 BICD2Q8TD16 824 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 IL17RAQ96F46 866 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 SPATA32Q96LK8 384 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 TRMT1Q9NXH9 659 aaKnown RBP23.29■■□□□ 1.32
LMBR1-213ENST00000454132 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
LMBR1-213ENST00000454132 CLIP2Q9UDT6 1046 aa23.29■■□□□ 1.32
LMBR1-213ENST00000454132 RBM8AQ9Y5S9 174 aaKnown RBP23.29■■□□□ 1.32
LMBR1-213ENST00000454132 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
LMBR1-213ENST00000454132 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
LMBR1-213ENST00000454132 ZNF75DP51815 510 aa23.28■■□□□ 1.32
LMBR1-213ENST00000454132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.28■■□□□ 1.32
LMBR1-213ENST00000454132 VPS53Q5VIR6 699 aa23.27■■□□□ 1.32
LMBR1-213ENST00000454132 ERCC4Q92889 916 aaPredicted RBP23.27■■□□□ 1.32
LMBR1-213ENST00000454132 ZNF165P49910 485 aa23.27■■□□□ 1.32
LMBR1-213ENST00000454132 GNAT3A8MTJ3 354 aa23.26■■□□□ 1.31
LMBR1-213ENST00000454132 TPM3P06753 285 aa23.26■■□□□ 1.31
LMBR1-213ENST00000454132 CCDC112Q8NEF3 446 aa23.26■■□□□ 1.31
LMBR1-213ENST00000454132 ZSWIM6Q9HCJ5 1215 aa23.26■■□□□ 1.31
LMBR1-213ENST00000454132 CTNNA3Q9UI47 895 aa23.26■■□□□ 1.31
LMBR1-213ENST00000454132 CREB3L3Q68CJ9 461 aa23.26■■□□□ 1.31
LMBR1-213ENST00000454132 CCDC8Q9H0W5 538 aaPredicted RBP23.25■■□□□ 1.31
LMBR1-213ENST00000454132 CHPF2Q9P2E5 772 aa23.25■■□□□ 1.31
LMBR1-213ENST00000454132 AOX1Q06278 1338 aa23.25■■□□□ 1.31
LMBR1-213ENST00000454132 KIF20AO95235 890 aa23.25■■□□□ 1.31
LMBR1-213ENST00000454132 POLA2Q14181 598 aa23.25■■□□□ 1.31
LMBR1-213ENST00000454132 DLC1Q96QB1 1528 aa23.24■■□□□ 1.31
LMBR1-213ENST00000454132 KCNQ3O43525 872 aa23.24■■□□□ 1.31
LMBR1-213ENST00000454132 JAK2O60674 1132 aa23.24■■□□□ 1.31
LMBR1-213ENST00000454132 ZKSCAN1P17029 563 aaPredicted RBP23.24■■□□□ 1.31
LMBR1-213ENST00000454132 FILIP1Q7Z7B0 1213 aa23.24■■□□□ 1.31
LMBR1-213ENST00000454132 NMIQ13287 307 aaPredicted RBP23.23■■□□□ 1.31
LMBR1-213ENST00000454132 PEAK1Q9H792 1746 aa23.23■■□□□ 1.31
LMBR1-213ENST00000454132 SMTNL1A8MU46 457 aa23.23■■□□□ 1.31
LMBR1-213ENST00000454132 GLRX3O76003 335 aaKnown RBP23.23■■□□□ 1.31
LMBR1-213ENST00000454132 IFIT2P09913 472 aaKnown RBP23.23■■□□□ 1.31
LMBR1-213ENST00000454132 AACSQ86V21 672 aa23.23■■□□□ 1.31
LMBR1-213ENST00000454132 PGBD1Q96JS3 809 aa23.23■■□□□ 1.31
LMBR1-213ENST00000454132 OGFRQ9NZT2 677 aa23.23■■□□□ 1.31
LMBR1-213ENST00000454132 CLASRPQ8N2M8 674 aaKnown RBP23.22■■□□□ 1.31
LMBR1-213ENST00000454132 LEO1Q8WVC0 666 aaPredicted RBP23.22■■□□□ 1.31
LMBR1-213ENST00000454132 ZSCAN31Q96LW9 406 aaPredicted RBP23.22■■□□□ 1.31
LMBR1-213ENST00000454132 SH2B1Q9NRF2 756 aaPredicted RBP23.22■■□□□ 1.31
LMBR1-213ENST00000454132 FTOQ9C0B1 505 aaKnown RBP eCLIP23.22■■□□□ 1.31
LMBR1-213ENST00000454132 SIL1Q9H173 461 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 ST7Q9NRC1 585 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 USP16Q9Y5T5 823 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 A2ML1A8K2U0 1454 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 NECTIN1Q15223 517 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 RUFY2Q8WXA3 655 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 EDC3Q96F86 508 aaKnown RBP23.22■■□□□ 1.31
LMBR1-213ENST00000454132 BOLA2Q9H3K6 86 aa23.22■■□□□ 1.31
LMBR1-213ENST00000454132 CCDC171Q6TFL3 1326 aa23.21■■□□□ 1.31
LMBR1-213ENST00000454132 CEP170BQ9Y4F5 1589 aaPredicted RBP23.21■■□□□ 1.31
LMBR1-213ENST00000454132 CEP135Q66GS9 1140 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms