RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 METTL22Q9BUU2 404 aaPredicted RBP15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 A0A087WZG4 1122 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 BEND3Q5T5X7 828 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 TTLL7Q6ZT98 887 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 LINS1Q8NG48 757 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 CCDC136Q96JN2 1154 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ARXQ96QS3 562 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ZBTB40Q9NUA8 1239 aa15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ERVV-1B6SEH8 477 aa15.79■□□□□ 0.12
HLA-DPA1-244ENST00000453337 GNAI3P08754 354 aa15.79■□□□□ 0.12
HLA-DPA1-244ENST00000453337 KCNQ4P56696 695 aa15.79■□□□□ 0.12
HLA-DPA1-244ENST00000453337 HDAC5Q9UQL6 1122 aa15.79■□□□□ 0.12
HLA-DPA1-244ENST00000453337 RREB1Q92766 1687 aa15.79■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
HLA-DPA1-244ENST00000453337 MAP3K15Q6ZN16 1313 aa15.78■□□□□ 0.12
HLA-DPA1-244ENST00000453337 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
HLA-DPA1-244ENST00000453337 TXNRD1Q16881 649 aa15.78■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ARFGEF2Q9Y6D5 1785 aa15.77■□□□□ 0.12
HLA-DPA1-244ENST00000453337 SF3B2Q13435 895 aaKnown RBP15.77■□□□□ 0.12
HLA-DPA1-244ENST00000453337 HSP90AB3PQ58FF7 597 aa15.77■□□□□ 0.12
HLA-DPA1-244ENST00000453337 DZIP3Q86Y13 1208 aaKnown RBP15.77■□□□□ 0.12
HLA-DPA1-244ENST00000453337 MYD88Q99836 296 aa15.77■□□□□ 0.12
HLA-DPA1-244ENST00000453337 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
HLA-DPA1-244ENST00000453337 IBTKQ9P2D0 1353 aaPredicted RBP15.76■□□□□ 0.11
HLA-DPA1-244ENST00000453337 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
HLA-DPA1-244ENST00000453337 ZBTB3Q9H5J0 574 aa15.76■□□□□ 0.11
HLA-DPA1-244ENST00000453337 LRRC4BQ9NT99 713 aa15.76■□□□□ 0.11
HLA-DPA1-244ENST00000453337 NUP98P52948 1817 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 TCIRG1Q13488 830 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 CCDC125Q86Z20 511 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 PROM2Q8N271 834 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 AK7Q96M32 723 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 USP44Q9H0E7 712 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
HLA-DPA1-244ENST00000453337 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 AFDNP55196 1824 aaKnown RBP15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 NEURL1BA8MQ27 555 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 RGL2O15211 777 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 GNPATO15228 680 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 GNAI2P04899 355 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 IGKV5-2P06315 115 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 CCDC191Q8NCU4 936 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 MEIS3Q99687 375 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 C4BP0C0L5 1744 aa15.74■□□□□ 0.11
HLA-DPA1-244ENST00000453337 RGPD3A6NKT7 1758 aaPredicted RBP15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 RGPD4Q7Z3J3 1758 aa15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 UBTFL1P0CB47 393 aaPredicted RBP15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 TRAPPC3LQ5T215 181 aa15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 PCDHB15Q9Y5E8 787 aa15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 COL15A1P39059 1388 aa15.73■□□□□ 0.11
HLA-DPA1-244ENST00000453337 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 GRM8O00222 908 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 ADRA2BP18089 450 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 BAG6P46379 1132 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 GCKRQ14397 625 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 ISCA1Q9BUE6 129 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 CWC25Q9NXE8 425 aaPredicted RBP15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
HLA-DPA1-244ENST00000453337 UTYO14607 1347 aa15.71■□□□□ 0.11
HLA-DPA1-244ENST00000453337 ZPR1O75312 459 aa15.71■□□□□ 0.11
HLA-DPA1-244ENST00000453337 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
HLA-DPA1-244ENST00000453337 HLFQ16534 295 aa15.71■□□□□ 0.11
HLA-DPA1-244ENST00000453337 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
HLA-DPA1-244ENST00000453337 RFC4P35249 363 aa15.7■□□□□ 0.1
HLA-DPA1-244ENST00000453337 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
HLA-DPA1-244ENST00000453337 NBPF7P0C2Y1 421 aaPredicted RBP15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 SSFA2P28290 1259 aa15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 EN1Q05925 392 aaPredicted RBP15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 ANKRD36CQ5JPF3 1778 aa15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
HLA-DPA1-244ENST00000453337 H7C1W4 665 aa15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 CENPQQ7L2Z9 268 aaPredicted RBP15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 ZNF34Q8IZ26 560 aa15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 C1orf115Q9H7X2 142 aa15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 EP400Q96L91 3159 aa15.68■□□□□ 0.1
HLA-DPA1-244ENST00000453337 HMMRO75330 724 aa15.67■□□□□ 0.1
HLA-DPA1-244ENST00000453337 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
HLA-DPA1-244ENST00000453337 EZH2Q15910 746 aaKnown RBP15.67■□□□□ 0.1
HLA-DPA1-244ENST00000453337 PARP10Q53GL7 1025 aa15.67■□□□□ 0.1
HLA-DPA1-244ENST00000453337 AKT1S1Q96B36 256 aa15.67■□□□□ 0.1
HLA-DPA1-244ENST00000453337 LRRFIP2Q9Y608 721 aaKnown RBP15.67■□□□□ 0.1
HLA-DPA1-244ENST00000453337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 IGHDP01880 384 aa15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 PCCAP05165 728 aaPredicted RBP15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 GPTP24298 496 aa15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms