RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SIK1P57059 783 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 ITPK1Q13572 414 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 PLBD2Q8NHP8 589 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
SDC4P-201ENST00000453285 SRCIN1Q9C0H9 1055 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
SDC4P-201ENST00000453285 GNAI3P08754 354 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 ATP6V1AP38606 617 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 CEP85Q6P2H3 762 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 INTS5Q6P9B9 1019 aaKnown RBP7.55□□□□□ -1.2
SDC4P-201ENST00000453285 KRT27Q7Z3Y8 459 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 RIC3Q7Z5B4 369 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 SKAP1Q86WV1 359 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 RPAP2Q8IXW5 612 aaPredicted RBP7.55□□□□□ -1.2
SDC4P-201ENST00000453285 SMC5Q8IY18 1101 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 ANKRD44Q8N8A2 993 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 LINS1Q8NG48 757 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 ZBTB1Q9Y2K1 713 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 CASZ1Q86V15 1759 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 UBR3Q6ZT12 1888 aa7.55□□□□□ -1.2
SDC4P-201ENST00000453285 UTYO14607 1347 aa7.54□□□□□ -1.2
SDC4P-201ENST00000453285 NEURL1BA8MQ27 555 aa7.54□□□□□ -1.2
SDC4P-201ENST00000453285 GNAI2P04899 355 aa7.54□□□□□ -1.2
SDC4P-201ENST00000453285 NBPF7P0C2Y1 421 aaPredicted RBP7.54□□□□□ -1.2
SDC4P-201ENST00000453285 IL6STP40189 918 aaPredicted RBP7.54□□□□□ -1.2
SDC4P-201ENST00000453285 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
SDC4P-201ENST00000453285 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
SDC4P-201ENST00000453285 MYD88Q99836 296 aa7.54□□□□□ -1.2
SDC4P-201ENST00000453285 TNS1Q9HBL0 1735 aaKnown RBP7.54□□□□□ -1.2
SDC4P-201ENST00000453285 C4AP0C0L4 1744 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 C4BP0C0L5 1744 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 RXRBP28702 533 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 CRKLP46109 303 aaKnown RBP7.53□□□□□ -1.2
SDC4P-201ENST00000453285 EIF5P55010 431 aaKnown RBP7.53□□□□□ -1.2
SDC4P-201ENST00000453285 ATP8B2P98198 1209 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 GCKRQ14397 625 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 FAM196AQ6ZSG2 479 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 KAZALD1Q96I82 304 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 ISCA1Q9BUE6 129 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 BCL11BQ9C0K0 894 aaPredicted RBP7.53□□□□□ -1.2
SDC4P-201ENST00000453285 DCTPP1Q9H773 170 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 CCDC87Q9NVE4 849 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 PDZRN3Q9UPQ7 1066 aa7.53□□□□□ -1.2
SDC4P-201ENST00000453285 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
SDC4P-201ENST00000453285 MAP3K15Q6ZN16 1313 aa7.52□□□□□ -1.2
SDC4P-201ENST00000453285 PNMA6EA0A0J9YXQ4 647 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 GRM8O00222 908 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 UBTFL1P0CB47 393 aaPredicted RBP7.52□□□□□ -1.21
SDC4P-201ENST00000453285 CASP7P55210 303 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 KCNQ4P56696 695 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 NEXNQ0ZGT2 675 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 ZBTB3Q9H5J0 574 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 TUBGCP6Q96RT7 1819 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.21
SDC4P-201ENST00000453285 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
SDC4P-201ENST00000453285 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 SCN7AQ01118 1682 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 COL15A1P39059 1388 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 ATP5J2-PTCD1G3V325 749 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 H7C1W4 665 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 PDE4AP27815 886 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 NUCB1Q02818 461 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 TRIM28Q13263 835 aaKnown RBP7.51□□□□□ -1.21
SDC4P-201ENST00000453285 TCIRG1Q13488 830 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 MTX1Q13505 466 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 POLA2Q14181 598 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 HLFQ16534 295 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 RC3H1Q5TC82 1133 aaKnown RBP7.51□□□□□ -1.21
SDC4P-201ENST00000453285 GIGYF2Q6Y7W6 1299 aaKnown RBP7.51□□□□□ -1.21
SDC4P-201ENST00000453285 SSH3Q8TE77 659 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 GCC1Q96CN9 775 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 SUCLG2Q96I99 432 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 C9orf78Q9NZ63 289 aaPredicted RBP7.51□□□□□ -1.21
SDC4P-201ENST00000453285 DDX60Q8IY21 1712 aaKnown RBP7.51□□□□□ -1.21
SDC4P-201ENST00000453285 EP400Q96L91 3159 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 LAMB2P55268 1798 aa7.51□□□□□ -1.21
SDC4P-201ENST00000453285 ERVV-1B6SEH8 477 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 TRIM37O94972 964 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 EPHA10Q5JZY3 1008 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 KIF6Q6ZMV9 814 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 PPP1R42Q7Z4L9 355 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 DZIP3Q86Y13 1208 aaKnown RBP7.5□□□□□ -1.21
SDC4P-201ENST00000453285 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
SDC4P-201ENST00000453285 LRRC4BQ9NT99 713 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 CCNL1Q9UK58 526 aaPredicted RBP7.5□□□□□ -1.21
SDC4P-201ENST00000453285 TBC1D2BQ9UPU7 963 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
SDC4P-201ENST00000453285 AK9Q5TCS8 1911 aa7.5□□□□□ -1.21
SDC4P-201ENST00000453285 A0A087WZG4 1122 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 HMMRO75330 724 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 RPS6KA4O75676 772 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 CAMTA2O94983 1202 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 CHD1LQ86WJ1 897 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 ZNF34Q8IZ26 560 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 PELP1Q8IZL8 1130 aaKnown RBP7.49□□□□□ -1.21
SDC4P-201ENST00000453285 PROM2Q8N271 834 aa7.49□□□□□ -1.21
SDC4P-201ENST00000453285 BICC1Q9H694 974 aaKnown RBP7.49□□□□□ -1.21
SDC4P-201ENST00000453285 CWC25Q9NXE8 425 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms