RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
CHL1-208ENST00000453040 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
CHL1-208ENST00000453040 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 FOXR1Q6PIV2 292 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 BRMS1Q9HCU9 246 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 SASH3O75995 380 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
CHL1-208ENST00000453040 SWT1Q5T5J6 900 aaKnown RBP13.05□□□□□ -0.32
CHL1-208ENST00000453040 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 LRMPQ12912 555 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 SMTNL1A8MU46 457 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
CHL1-208ENST00000453040 PDE1AP54750 535 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
CHL1-208ENST00000453040 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
CHL1-208ENST00000453040 RPAP2Q8IXW5 612 aaPredicted RBP13.04□□□□□ -0.32
CHL1-208ENST00000453040 ZNF215Q9UL58 517 aaPredicted RBP13.04□□□□□ -0.32
CHL1-208ENST00000453040 MAP9Q49MG5 647 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 CXorf56Q9H5V9 222 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
CHL1-208ENST00000453040 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 ERC2O15083 957 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 KDM4AO75164 1064 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 PHF14O94880 888 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 ANAPC15P60006 121 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
CHL1-208ENST00000453040 CEP120Q8N960 986 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 MEIS3Q99687 375 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 C10orf67Q8IYJ2 551 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 SUFUQ9UMX1 484 aa13.03□□□□□ -0.32
CHL1-208ENST00000453040 CHL1O00533 1208 aa13.02□□□□□ -0.32
CHL1-208ENST00000453040 GNAI1P63096 354 aa13.02□□□□□ -0.32
CHL1-208ENST00000453040 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.32
CHL1-208ENST00000453040 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.32
CHL1-208ENST00000453040 ST18O60284 1047 aa13.02□□□□□ -0.33
CHL1-208ENST00000453040 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.33
CHL1-208ENST00000453040 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHL1-208ENST00000453040 ZCCHC17Q9NP64 241 aaKnown RBP13.02□□□□□ -0.33
CHL1-208ENST00000453040 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHL1-208ENST00000453040 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
CHL1-208ENST00000453040 V9GYY5 206 aaPredicted RBP13.02□□□□□ -0.33
CHL1-208ENST00000453040 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 APPP05067 770 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 CCDC93Q567U6 631 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
CHL1-208ENST00000453040 API5Q9BZZ5 524 aaKnown RBP13.01□□□□□ -0.33
CHL1-208ENST00000453040 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
CHL1-208ENST00000453040 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
CHL1-208ENST00000453040 CHMLP26374 656 aa13.01□□□□□ -0.33
CHL1-208ENST00000453040 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
CHL1-208ENST00000453040 ARHGEF10O15013 1369 aa13□□□□□ -0.33
CHL1-208ENST00000453040 PNMA6AP0CW24 399 aaPredicted RBP13□□□□□ -0.33
CHL1-208ENST00000453040 MX1P20591 662 aa13□□□□□ -0.33
CHL1-208ENST00000453040 SUGP1Q8IWZ8 645 aaKnown RBP13□□□□□ -0.33
CHL1-208ENST00000453040 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
CHL1-208ENST00000453040 ANKRD33BA6NCL7 494 aa13□□□□□ -0.33
CHL1-208ENST00000453040 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
CHL1-208ENST00000453040 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
CHL1-208ENST00000453040 IDI1Q13907 227 aa13□□□□□ -0.33
CHL1-208ENST00000453040 ELF2Q15723 593 aa13□□□□□ -0.33
CHL1-208ENST00000453040 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
CHL1-208ENST00000453040 HSPA4P34932 840 aa12.99□□□□□ -0.33
CHL1-208ENST00000453040 CHAF1AQ13111 956 aaPredicted RBP12.99□□□□□ -0.33
CHL1-208ENST00000453040 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
CHL1-208ENST00000453040 RBM43Q6ZSC3 357 aaKnown RBP12.99□□□□□ -0.33
CHL1-208ENST00000453040 KAT2BQ92831 832 aa12.99□□□□□ -0.33
CHL1-208ENST00000453040 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
CHL1-208ENST00000453040 KRBA2Q6ZNG9 492 aa12.99□□□□□ -0.33
CHL1-208ENST00000453040 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
CHL1-208ENST00000453040 DDX60Q8IY21 1712 aaKnown RBP12.98□□□□□ -0.33
CHL1-208ENST00000453040 CPP00450 1065 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 FAM163BP0C2L3 166 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 KCNV1Q6PIU1 500 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
CHL1-208ENST00000453040 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 MCM2P49736 904 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 E2F4Q16254 413 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 KCNB2Q92953 911 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 DRC1Q96MC2 740 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
CHL1-208ENST00000453040 PTGS1P23219 599 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 CLCN6P51797 869 aa12.98□□□□□ -0.33
CHL1-208ENST00000453040 NEK4P51957 841 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms