RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
DDR1-239ENST00000452441 HSP90AB4PQ58FF6 505 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 COPS6Q7L5N1 327 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 USP6P35125 1406 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 ZSCAN30Q86W11 494 aa13.38□□□□□ -0.27
DDR1-239ENST00000452441 GADD45BO75293 160 aaPredicted RBP13.37□□□□□ -0.27
DDR1-239ENST00000452441 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 GIMAP6Q6P9H5 292 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 XAGE3Q8WTP9 111 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 FMNL2Q96PY5 1086 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 HCLS1P14317 486 aaPredicted RBP13.37□□□□□ -0.27
DDR1-239ENST00000452441 CHMLP26374 656 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
DDR1-239ENST00000452441 C17orf53Q8N3J3 647 aaPredicted RBP13.37□□□□□ -0.27
DDR1-239ENST00000452441 KIF1BPQ96EK5 621 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
DDR1-239ENST00000452441 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
DDR1-239ENST00000452441 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
DDR1-239ENST00000452441 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
DDR1-239ENST00000452441 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
DDR1-239ENST00000452441 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
DDR1-239ENST00000452441 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDR1-239ENST00000452441 USP44Q9H0E7 712 aa13.36□□□□□ -0.27
DDR1-239ENST00000452441 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
DDR1-239ENST00000452441 RGS12O14924 1447 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 AGLP35573 1532 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 A0A087WZG4 1122 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 PROSER3Q2NL68 480 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 RAB11FIP3O75154 756 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 USP48Q86UV5 1035 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
DDR1-239ENST00000452441 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
DDR1-239ENST00000452441 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
DDR1-239ENST00000452441 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
DDR1-239ENST00000452441 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 C3P01024 1663 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 MON2Q7Z3U7 1717 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 TMEM63CQ9P1W3 806 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 RRP9O43818 475 aaKnown RBP13.34□□□□□ -0.27
DDR1-239ENST00000452441 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
DDR1-239ENST00000452441 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
DDR1-239ENST00000452441 GPT2Q8TD30 523 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 PPP1R9BQ96SB3 815 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 RIMS1Q86UR5 1692 aaKnown RBP13.33□□□□□ -0.28
DDR1-239ENST00000452441 PEAK1Q9H792 1746 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
DDR1-239ENST00000452441 ATP2B1P20020 1258 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 AK2P54819 239 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 DNM1Q05193 864 aaKnown RBP13.33□□□□□ -0.28
DDR1-239ENST00000452441 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 ATP10DQ9P241 1426 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.28
DDR1-239ENST00000452441 GJB2P29033 226 aa13.33□□□□□ -0.28
DDR1-239ENST00000452441 SF3A1Q15459 793 aaKnown RBP13.33□□□□□ -0.28
DDR1-239ENST00000452441 TTC12Q9H892 705 aaPredicted RBP13.33□□□□□ -0.28
DDR1-239ENST00000452441 ZNF445P59923 1031 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 TSC1Q92574 1164 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 ADAMTS13Q76LX8 1427 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 CCDC129Q6ZRS4 1044 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 ZDHHC9Q9Y397 364 aa13.32□□□□□ -0.28
DDR1-239ENST00000452441 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
DDR1-239ENST00000452441 HAND2P61296 217 aa13.31□□□□□ -0.28
DDR1-239ENST00000452441 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
DDR1-239ENST00000452441 LARP1Q6PKG0 1096 aaKnown RBP13.31□□□□□ -0.28
DDR1-239ENST00000452441 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
DDR1-239ENST00000452441 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
DDR1-239ENST00000452441 WDR33Q9C0J8 1336 aaKnown RBP13.31□□□□□ -0.28
DDR1-239ENST00000452441 AKAP12Q02952 1782 aa13.31□□□□□ -0.28
DDR1-239ENST00000452441 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
DDR1-239ENST00000452441 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
DDR1-239ENST00000452441 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
DDR1-239ENST00000452441 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 IGSF1Q8N6C5 1336 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 TPM2P07951 284 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 IL25Q9H293 177 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 PHF14O94880 888 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
DDR1-239ENST00000452441 ZBTB9Q96C00 473 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 TECPR2O15040 1411 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
DDR1-239ENST00000452441 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms