RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 MAP3K15Q6ZN16 1313 aa15.22■□□□□ 0.03
LINC00339-205ENST00000452322 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
LINC00339-205ENST00000452322 GYS1P13807 737 aa15.22■□□□□ 0.03
LINC00339-205ENST00000452322 BRPF1P55201 1214 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-205ENST00000452322 AIMP1Q12904 312 aaKnown RBP15.22■□□□□ 0.03
LINC00339-205ENST00000452322 FLIIQ13045 1269 aa15.22■□□□□ 0.03
LINC00339-205ENST00000452322 MRPL50Q8N5N7 158 aaKnown RBP15.22■□□□□ 0.03
LINC00339-205ENST00000452322 ARXQ96QS3 562 aa15.22■□□□□ 0.03
LINC00339-205ENST00000452322 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
LINC00339-205ENST00000452322 DDX58O95786 925 aaKnown RBP15.21■□□□□ 0.02
LINC00339-205ENST00000452322 CLEC4GQ6UXB4 293 aa15.21■□□□□ 0.02
LINC00339-205ENST00000452322 G2E3Q7L622 706 aa15.21■□□□□ 0.02
LINC00339-205ENST00000452322 BCL2L13Q9BXK5 485 aa15.21■□□□□ 0.02
LINC00339-205ENST00000452322 MTFR1LQ9H019 292 aa15.21■□□□□ 0.02
LINC00339-205ENST00000452322 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.02
LINC00339-205ENST00000452322 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.02
LINC00339-205ENST00000452322 ANKRD13DQ6ZTN6 518 aa15.2■□□□□ 0.02
LINC00339-205ENST00000452322 NLGN1Q8N2Q7 840 aa15.2■□□□□ 0.02
LINC00339-205ENST00000452322 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
LINC00339-205ENST00000452322 ZBTB3Q9H5J0 574 aa15.2■□□□□ 0.02
LINC00339-205ENST00000452322 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
LINC00339-205ENST00000452322 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
LINC00339-205ENST00000452322 ARFGEF2Q9Y6D5 1785 aa15.19■□□□□ 0.02
LINC00339-205ENST00000452322 NUP98P52948 1817 aa15.18■□□□□ 0.02
LINC00339-205ENST00000452322 ZBTB7AO95365 584 aa15.18■□□□□ 0.02
LINC00339-205ENST00000452322 FKBP5Q13451 457 aaPredicted RBP15.18■□□□□ 0.02
LINC00339-205ENST00000452322 FKBP8Q14318 412 aa15.18■□□□□ 0.02
LINC00339-205ENST00000452322 HLFQ16534 295 aa15.18■□□□□ 0.02
LINC00339-205ENST00000452322 PTPRCP08575 1304 aa15.18■□□□□ 0.02
LINC00339-205ENST00000452322 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
LINC00339-205ENST00000452322 ATP10DQ9P241 1426 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 HSP90AB3PQ58FF7 597 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 KSR2Q6VAB6 950 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 RIC3Q7Z5B4 369 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 ADCY9O60503 1353 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 ANKRD36CQ5JPF3 1778 aa15.17■□□□□ 0.02
LINC00339-205ENST00000452322 PI4KAP2A4QPH2 592 aa15.16■□□□□ 0.02
LINC00339-205ENST00000452322 BCAR3O75815 825 aa15.16■□□□□ 0.02
LINC00339-205ENST00000452322 MSL1Q68DK7 614 aa15.16■□□□□ 0.02
LINC00339-205ENST00000452322 PI4KAP1Q8N8J0 262 aa15.16■□□□□ 0.02
LINC00339-205ENST00000452322 TM4SF1P30408 202 aa15.15■□□□□ 0.02
LINC00339-205ENST00000452322 TCIRG1Q13488 830 aa15.15■□□□□ 0.02
LINC00339-205ENST00000452322 TBC1D9BQ66K14 1250 aa15.15■□□□□ 0.02
LINC00339-205ENST00000452322 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
LINC00339-205ENST00000452322 NFIXQ14938 502 aa15.14■□□□□ 0.01
LINC00339-205ENST00000452322 DNAAF4Q8WXU2 420 aa15.14■□□□□ 0.01
LINC00339-205ENST00000452322 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
LINC00339-205ENST00000452322 METTL22Q9BUU2 404 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-205ENST00000452322 SPON1Q9HCB6 807 aa15.14■□□□□ 0.01
LINC00339-205ENST00000452322 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
LINC00339-205ENST00000452322 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-205ENST00000452322 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 MMP10P09238 476 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 POLD1P28340 1107 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 ZNF34Q8IZ26 560 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 SGIP1Q9BQI5 828 aa15.13■□□□□ 0.01
LINC00339-205ENST00000452322 API5Q9BZZ5 524 aaKnown RBP15.13■□□□□ 0.01
LINC00339-205ENST00000452322 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00339-205ENST00000452322 POLRMTO00411 1230 aaKnown RBP15.12■□□□□ 0.01
LINC00339-205ENST00000452322 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
LINC00339-205ENST00000452322 PTGER2P43116 358 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 DDR1Q08345 913 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 PARP10Q53GL7 1025 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 BICDL1Q6ZP65 573 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 ISCA1Q9BUE6 129 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-205ENST00000452322 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
LINC00339-205ENST00000452322 F6X3S4 739 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 GPTP24298 496 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
LINC00339-205ENST00000452322 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-205ENST00000452322 MYD88Q99836 296 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 ATF7IPQ6VMQ6 1270 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 NLRP10Q86W26 655 aa15.11■□□□□ 0.01
LINC00339-205ENST00000452322 LRP5O75197 1615 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 SERPINB2P05120 415 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 IGKV5-2P06315 115 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 TRIM27P14373 513 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 BEND3Q5T5X7 828 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 LINS1Q8NG48 757 aa15.1■□□□□ 0.01
LINC00339-205ENST00000452322 AFDNP55196 1824 aaKnown RBP15.09■□□□□ 0.01
LINC00339-205ENST00000452322 N4BP2Q86UW6 1770 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-205ENST00000452322 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
LINC00339-205ENST00000452322 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
LINC00339-205ENST00000452322 SLC4A10Q6U841 1118 aa15.09■□□□□ 0.01
LINC00339-205ENST00000452322 PPP1R42Q7Z4L9 355 aa15.09■□□□□ 0.01
LINC00339-205ENST00000452322 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-205ENST00000452322 NYXQ9GZU5 481 aa15.09■□□□□ 0.01
LINC00339-205ENST00000452322 ABCC4O15439 1325 aa15.08■□□□□ 0
LINC00339-205ENST00000452322 NEURL1BA8MQ27 555 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms