RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
CSNK1E-211ENST00000451964 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
CSNK1E-211ENST00000451964 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 ERVV-1B6SEH8 477 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 H0YIN7 160 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 ANXA1P04083 346 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 ERBB4Q15303 1308 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 MAP3K15Q6ZN16 1313 aa16.14■□□□□ 0.17
CSNK1E-211ENST00000451964 ADCY9O60503 1353 aa16.13■□□□□ 0.17
CSNK1E-211ENST00000451964 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
CSNK1E-211ENST00000451964 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
CSNK1E-211ENST00000451964 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
CSNK1E-211ENST00000451964 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
CSNK1E-211ENST00000451964 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
CSNK1E-211ENST00000451964 PDE6BP35913 854 aa16.12■□□□□ 0.17
CSNK1E-211ENST00000451964 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
CSNK1E-211ENST00000451964 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
CSNK1E-211ENST00000451964 MBIPQ9NS73 344 aa16.12■□□□□ 0.17
CSNK1E-211ENST00000451964 ST5P78524 1137 aa16.11■□□□□ 0.17
CSNK1E-211ENST00000451964 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
CSNK1E-211ENST00000451964 NPHP1O15259 732 aa16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 ZNF622Q969S3 477 aaKnown RBP eCLIP16.1■□□□□ 0.177e-8■■■□□ 16.9
CSNK1E-211ENST00000451964 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 PDZRN3Q9UPQ7 1066 aa16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-211ENST00000451964 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 SRGNP10124 158 aa16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 GPTP24298 496 aa16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 C9orf131Q5VYM1 1079 aa16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 COPS6Q7L5N1 327 aa16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-211ENST00000451964 PRELPP51888 382 aa16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 GNAI1P63096 354 aa16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 GIGYF2Q6Y7W6 1299 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 XAGE3Q8WTP9 111 aa16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 UBN2Q6ZU65 1347 aa16.08■□□□□ 0.16
CSNK1E-211ENST00000451964 HOXB7P09629 217 aa16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 RASSF7Q02833 373 aa16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 SUSD4Q5VX71 490 aa16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 STYK1Q6J9G0 422 aa16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
CSNK1E-211ENST00000451964 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 C21orf2O43822 256 aa16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 GPBP1L1Q9HC44 474 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
CSNK1E-211ENST00000451964 ANKRD31Q8N7Z5 1873 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 NFKBIEO00221 500 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 CCDC27Q2M243 656 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 C8orf58Q8NAV2 365 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 CNKSR1Q969H4 720 aa16.05■□□□□ 0.16
CSNK1E-211ENST00000451964 NTSR2O95665 410 aa16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 C1QTNF8P60827 252 aa16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 NYXQ9GZU5 481 aa16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 RNF181Q9P0P0 153 aa16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-211ENST00000451964 NPR1P16066 1061 aa16.03■□□□□ 0.16
CSNK1E-211ENST00000451964 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-211ENST00000451964 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
CSNK1E-211ENST00000451964 CRY2Q49AN0 593 aa16.02■□□□□ 0.16
CSNK1E-211ENST00000451964 PARP10Q53GL7 1025 aa16.02■□□□□ 0.16
CSNK1E-211ENST00000451964 C3orf67Q6ZVT6 689 aa16.02■□□□□ 0.16
CSNK1E-211ENST00000451964 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
CSNK1E-211ENST00000451964 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.15
CSNK1E-211ENST00000451964 IBTKQ9P2D0 1353 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 LMNB1P20700 586 aa16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 NLRP10Q86W26 655 aa16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
CSNK1E-211ENST00000451964 DLEC1Q9Y238 1755 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 KIF3CO14782 793 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 OLFM4Q6UX06 510 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 ANKRD13DQ6ZTN6 518 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 PPP1R42Q7Z4L9 355 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 SYNE4Q8N205 404 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 PLBD2Q8NHP8 589 aa16■□□□□ 0.15
CSNK1E-211ENST00000451964 UTP14AQ9BVJ6 771 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms