RNA–Protein interactions for RNA: ENST00000450324.1

LINC02248-201, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-201ENST00000450324 CHL1O00533 1208 aa14.29□□□□□ -0.12
LINC02248-201ENST00000450324 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
LINC02248-201ENST00000450324 MMP10P09238 476 aa14.29□□□□□ -0.12
LINC02248-201ENST00000450324 GNAI1P63096 354 aa14.29□□□□□ -0.12
LINC02248-201ENST00000450324 AAMPQ13685 434 aa14.29□□□□□ -0.12
LINC02248-201ENST00000450324 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
LINC02248-201ENST00000450324 SRP68Q9UHB9 627 aaKnown RBP14.29□□□□□ -0.12
LINC02248-201ENST00000450324 PRAMEF22A3QJZ6 481 aa14.28□□□□□ -0.12
LINC02248-201ENST00000450324 BCAR3O75815 825 aa14.28□□□□□ -0.12
LINC02248-201ENST00000450324 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
LINC02248-201ENST00000450324 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
LINC02248-201ENST00000450324 PARP3Q9Y6F1 533 aa14.28□□□□□ -0.12
LINC02248-201ENST00000450324 USPL1Q5W0Q7 1092 aa14.27□□□□□ -0.13
LINC02248-201ENST00000450324 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
LINC02248-201ENST00000450324 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
LINC02248-201ENST00000450324 EXOSC9Q06265 439 aaKnown RBP14.26□□□□□ -0.13
LINC02248-201ENST00000450324 C20orf194Q5TEA3 1177 aa14.26□□□□□ -0.13
LINC02248-201ENST00000450324 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
LINC02248-201ENST00000450324 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
LINC02248-201ENST00000450324 ERBB4Q15303 1308 aa14.25□□□□□ -0.13
LINC02248-201ENST00000450324 RGL2O15211 777 aa14.25□□□□□ -0.13
LINC02248-201ENST00000450324 TM4SF1P30408 202 aa14.25□□□□□ -0.13
LINC02248-201ENST00000450324 TSR2Q969E8 191 aaKnown RBP14.25□□□□□ -0.13
LINC02248-201ENST00000450324 KIAA1551Q9HCM1 1747 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 NBPF26B4DH59 902 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 ZNF853P0CG23 659 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 NBPF10Q6P3W6 841 aaKnown RBP14.24□□□□□ -0.13
LINC02248-201ENST00000450324 DZIP3Q86Y13 1208 aaKnown RBP14.24□□□□□ -0.13
LINC02248-201ENST00000450324 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 NLGN2Q8NFZ4 835 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 TBC1D2BQ9UPU7 963 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 LAMB4A4D0S4 1761 aa14.24□□□□□ -0.13
LINC02248-201ENST00000450324 HOXB7P09629 217 aa14.23□□□□□ -0.13
LINC02248-201ENST00000450324 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
LINC02248-201ENST00000450324 ZKSCAN2Q63HK3 967 aa14.23□□□□□ -0.13
LINC02248-201ENST00000450324 FRAT1Q92837 279 aaPredicted RBP14.23□□□□□ -0.13
LINC02248-201ENST00000450324 GOLGB1Q14789 3259 aaKnown RBP14.22□□□□□ -0.13
LINC02248-201ENST00000450324 POLRMTO00411 1230 aaKnown RBP14.22□□□□□ -0.13
LINC02248-201ENST00000450324 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
LINC02248-201ENST00000450324 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
LINC02248-201ENST00000450324 DDR1Q08345 913 aa14.22□□□□□ -0.13
LINC02248-201ENST00000450324 NFIXQ14938 502 aa14.22□□□□□ -0.13
LINC02248-201ENST00000450324 CLEC4GQ6UXB4 293 aa14.22□□□□□ -0.13
LINC02248-201ENST00000450324 SMC4Q9NTJ3 1288 aa14.22□□□□□ -0.13
LINC02248-201ENST00000450324 ZNF652Q9Y2D9 606 aa14.22□□□□□ -0.13
LINC02248-201ENST00000450324 NRXN2Q9P2S2 1712 aa14.21□□□□□ -0.13
LINC02248-201ENST00000450324 KIF16BQ96L93 1317 aa14.21□□□□□ -0.13
LINC02248-201ENST00000450324 BRCA1P38398 1863 aaKnown RBP14.21□□□□□ -0.13
LINC02248-201ENST00000450324 PIP4K2AP48426 406 aaPredicted RBP14.21□□□□□ -0.13
LINC02248-201ENST00000450324 TGFB2P61812 414 aa14.21□□□□□ -0.13
LINC02248-201ENST00000450324 CENPQQ7L2Z9 268 aaPredicted RBP14.21□□□□□ -0.13
LINC02248-201ENST00000450324 MBIPQ9NS73 344 aa14.21□□□□□ -0.13
LINC02248-201ENST00000450324 EIF2S2P20042 333 aaKnown RBP14.2□□□□□ -0.14
LINC02248-201ENST00000450324 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
LINC02248-201ENST00000450324 C10orf71Q711Q0 1435 aa14.2□□□□□ -0.14
LINC02248-201ENST00000450324 ERVV-1B6SEH8 477 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
LINC02248-201ENST00000450324 SERPINB2P05120 415 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 YBX3P16989 372 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC02248-201ENST00000450324 YY1P25490 414 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 GPR162Q16538 588 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 SCN7AQ01118 1682 aa14.19□□□□□ -0.14
LINC02248-201ENST00000450324 AFDNP55196 1824 aaKnown RBP14.18□□□□□ -0.14
LINC02248-201ENST00000450324 GRIN3BO60391 1043 aa14.18□□□□□ -0.14
LINC02248-201ENST00000450324 MYL6BP14649 208 aa14.18□□□□□ -0.14
LINC02248-201ENST00000450324 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
LINC02248-201ENST00000450324 KIF6Q6ZMV9 814 aa14.18□□□□□ -0.14
LINC02248-201ENST00000450324 BICDL1Q6ZP65 573 aa14.18□□□□□ -0.14
LINC02248-201ENST00000450324 FTSJ3Q8IY81 847 aaKnown RBP14.18□□□□□ -0.14
LINC02248-201ENST00000450324 KCNA3P22001 575 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 PDIA6Q15084 440 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 KRT24Q2M2I5 525 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 HDGFL1Q5TGJ6 251 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 DZIP1LQ8IYY4 767 aaKnown RBP14.17□□□□□ -0.14
LINC02248-201ENST00000450324 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 SSH1Q8WYL5 1049 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 DDX21Q9NR30 783 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC02248-201ENST00000450324 CARMIL3Q8ND23 1372 aa14.17□□□□□ -0.14
LINC02248-201ENST00000450324 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
LINC02248-201ENST00000450324 MAP3K15Q6ZN16 1313 aa14.16□□□□□ -0.14
LINC02248-201ENST00000450324 CLUAP1Q96AJ1 413 aa14.16□□□□□ -0.14
LINC02248-201ENST00000450324 BCL2L13Q9BXK5 485 aa14.16□□□□□ -0.14
LINC02248-201ENST00000450324 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
LINC02248-201ENST00000450324 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
LINC02248-201ENST00000450324 BCORQ6W2J9 1755 aa14.16□□□□□ -0.14
LINC02248-201ENST00000450324 VAMP4O75379 141 aa14.15□□□□□ -0.14
LINC02248-201ENST00000450324 ATF7IPQ6VMQ6 1270 aa14.15□□□□□ -0.14
LINC02248-201ENST00000450324 TTLL7Q6ZT98 887 aa14.15□□□□□ -0.14
LINC02248-201ENST00000450324 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
LINC02248-201ENST00000450324 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
LINC02248-201ENST00000450324 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
LINC02248-201ENST00000450324 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
LINC02248-201ENST00000450324 ARFGEF1Q9Y6D6 1849 aa14.15□□□□□ -0.14
LINC02248-201ENST00000450324 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.15
LINC02248-201ENST00000450324 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
LINC02248-201ENST00000450324 A0A0G2JLW4 131 aa14.14□□□□□ -0.15
LINC02248-201ENST00000450324 DPEP1P16444 411 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms