RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 DNAAF4Q8WXU2 420 aa18.55■□□□□ 0.56
TNF-208ENST00000449264 COL15A1P39059 1388 aa18.55■□□□□ 0.56
TNF-208ENST00000449264 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
TNF-208ENST00000449264 MVPQ14764 893 aaKnown RBP18.54■□□□□ 0.56
TNF-208ENST00000449264 ANKRD13DQ6ZTN6 518 aa18.54■□□□□ 0.56
TNF-208ENST00000449264 AK7Q96M32 723 aa18.54■□□□□ 0.56
TNF-208ENST00000449264 ZBTB3Q9H5J0 574 aa18.54■□□□□ 0.56
TNF-208ENST00000449264 UBR3Q6ZT12 1888 aa18.54■□□□□ 0.56
TNF-208ENST00000449264 EIF5P55010 431 aaKnown RBP18.54■□□□□ 0.56
TNF-208ENST00000449264 RC3H1Q5TC82 1133 aaKnown RBP18.54■□□□□ 0.56
TNF-208ENST00000449264 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
TNF-208ENST00000449264 BAG6P46379 1132 aa18.53■□□□□ 0.56
TNF-208ENST00000449264 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.56
TNF-208ENST00000449264 SMIM5Q71RC9 77 aa18.52■□□□□ 0.56
TNF-208ENST00000449264 DEFB132Q7Z7B7 95 aa18.52■□□□□ 0.56
TNF-208ENST00000449264 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
TNF-208ENST00000449264 PLBD2Q8NHP8 589 aa18.52■□□□□ 0.56
TNF-208ENST00000449264 TBC1D2BQ9UPU7 963 aa18.52■□□□□ 0.56
TNF-208ENST00000449264 C4AP0C0L4 1744 aa18.52■□□□□ 0.55
TNF-208ENST00000449264 BCORQ6W2J9 1755 aa18.51■□□□□ 0.55
TNF-208ENST00000449264 CCT4P50991 539 aaKnown RBP18.51■□□□□ 0.55
TNF-208ENST00000449264 INTS3Q68E01 1043 aaKnown RBP18.51■□□□□ 0.55
TNF-208ENST00000449264 RTCBQ9Y3I0 505 aaKnown RBP18.51■□□□□ 0.55
TNF-208ENST00000449264 NUP98P52948 1817 aa18.51■□□□□ 0.55
TNF-208ENST00000449264 PHF14O94880 888 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 MYD88Q99836 296 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 MAP3K15Q6ZN16 1313 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 TUBGCP6Q96RT7 1819 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 ATP10DQ9P241 1426 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 ANKRD36CQ5JPF3 1778 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 NEXNQ0ZGT2 675 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 CAMKK2Q96RR4 588 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
TNF-208ENST00000449264 METTL22Q9BUU2 404 aaPredicted RBP18.49■□□□□ 0.55
TNF-208ENST00000449264 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
TNF-208ENST00000449264 A0A087WZG4 1122 aa18.48■□□□□ 0.55
TNF-208ENST00000449264 BEND3Q5T5X7 828 aa18.48■□□□□ 0.55
TNF-208ENST00000449264 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
TNF-208ENST00000449264 ZNF827Q17R98 1081 aa18.47■□□□□ 0.55
TNF-208ENST00000449264 CWF19L2Q2TBE0 894 aaKnown RBP18.47■□□□□ 0.55
TNF-208ENST00000449264 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
TNF-208ENST00000449264 HLFQ16534 295 aa18.47■□□□□ 0.55
TNF-208ENST00000449264 CCDC125Q86Z20 511 aa18.47■□□□□ 0.55
TNF-208ENST00000449264 LINS1Q8NG48 757 aa18.46■□□□□ 0.55
TNF-208ENST00000449264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.45■□□□□ 0.54
TNF-208ENST00000449264 CAMTA2O94983 1202 aa18.45■□□□□ 0.54
TNF-208ENST00000449264 IGKV5-2P06315 115 aa18.45■□□□□ 0.54
TNF-208ENST00000449264 MEIS3Q99687 375 aa18.45■□□□□ 0.54
TNF-208ENST00000449264 TFCP2L1Q9NZI6 479 aa18.45■□□□□ 0.54
TNF-208ENST00000449264 NEURL1BA8MQ27 555 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 ERVV-1B6SEH8 477 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 GIGYF2Q6Y7W6 1299 aaKnown RBP18.44■□□□□ 0.54
TNF-208ENST00000449264 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
TNF-208ENST00000449264 ALDH1L1O75891 902 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 RFC4P35249 363 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 ERICH6BQ5W0A0 696 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
TNF-208ENST00000449264 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
TNF-208ENST00000449264 SRP68Q9UHB9 627 aaKnown RBP18.44■□□□□ 0.54
TNF-208ENST00000449264 ZPR1O75312 459 aa18.43■□□□□ 0.54
TNF-208ENST00000449264 ADRA2BP18089 450 aa18.43■□□□□ 0.54
TNF-208ENST00000449264 GPTP24298 496 aa18.43■□□□□ 0.54
TNF-208ENST00000449264 SSFA2P28290 1259 aa18.43■□□□□ 0.54
TNF-208ENST00000449264 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
TNF-208ENST00000449264 HSP90AB3PQ58FF7 597 aa18.43■□□□□ 0.54
TNF-208ENST00000449264 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
TNF-208ENST00000449264 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
TNF-208ENST00000449264 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
TNF-208ENST00000449264 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
TNF-208ENST00000449264 NARFQ9UHQ1 456 aa18.42■□□□□ 0.54
TNF-208ENST00000449264 ZNF652Q9Y2D9 606 aa18.42■□□□□ 0.54
TNF-208ENST00000449264 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
TNF-208ENST00000449264 C9orf78Q9NZ63 289 aaPredicted RBP18.41■□□□□ 0.54
TNF-208ENST00000449264 USP42Q9H9J4 1324 aaKnown RBP18.41■□□□□ 0.54
TNF-208ENST00000449264 GCKRQ14397 625 aa18.41■□□□□ 0.54
TNF-208ENST00000449264 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
TNF-208ENST00000449264 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
TNF-208ENST00000449264 STK32BQ9NY57 414 aa18.41■□□□□ 0.54
TNF-208ENST00000449264 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
TNF-208ENST00000449264 GRM8O00222 908 aa18.39■□□□□ 0.53
TNF-208ENST00000449264 MSH5O43196 834 aa18.39■□□□□ 0.53
TNF-208ENST00000449264 GNAI3P08754 354 aa18.39■□□□□ 0.53
TNF-208ENST00000449264 NBPF7P0C2Y1 421 aaPredicted RBP18.39■□□□□ 0.53
TNF-208ENST00000449264 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
TNF-208ENST00000449264 ILDR2Q71H61 639 aa18.39■□□□□ 0.53
TNF-208ENST00000449264 PPP4R2Q9NY27 417 aa18.39■□□□□ 0.53
TNF-208ENST00000449264 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
TNF-208ENST00000449264 AAMPQ13685 434 aa18.38■□□□□ 0.53
TNF-208ENST00000449264 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
TNF-208ENST00000449264 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
TNF-208ENST00000449264 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
TNF-208ENST00000449264 BCL2L12Q9HB09 334 aa18.38■□□□□ 0.53
TNF-208ENST00000449264 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
TNF-208ENST00000449264 UBN2Q6ZU65 1347 aa18.38■□□□□ 0.53
TNF-208ENST00000449264 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
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