RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 TTC12Q9H892 705 aaPredicted RBP8.41□□□□□ -1.06
BEST1-202ENST00000449131 ABCC1P33527 1531 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 PKP1Q13835 747 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
BEST1-202ENST00000449131 GNL3LQ9NVN8 582 aaKnown RBP8.41□□□□□ -1.06
BEST1-202ENST00000449131 ARGLU1Q9NWB6 273 aaPredicted RBP8.41□□□□□ -1.06
BEST1-202ENST00000449131 TDO2P48775 406 aa8.41□□□□□ -1.06
BEST1-202ENST00000449131 CCDC70Q6NSX1 233 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 GIMAP6Q6P9H5 292 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 G2E3Q7L622 706 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
BEST1-202ENST00000449131 CPA1P15085 419 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 CCT2P78371 535 aaKnown RBP8.4□□□□□ -1.06
BEST1-202ENST00000449131 SLC39A6Q13433 755 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 CHRNA2Q15822 529 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 MAP3K19Q56UN5 1328 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 INSRP06213 1382 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
BEST1-202ENST00000449131 STARD3NLO95772 234 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 IL13P35225 146 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 C17orf53Q8N3J3 647 aaPredicted RBP8.4□□□□□ -1.06
BEST1-202ENST00000449131 NECAB1Q8N987 351 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 CCDC112Q8NEF3 446 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 TSC1Q92574 1164 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
BEST1-202ENST00000449131 MAGI2Q86UL8 1455 aa8.4□□□□□ -1.07
BEST1-202ENST00000449131 GOLIM4O00461 696 aa8.4□□□□□ -1.07
BEST1-202ENST00000449131 SAMD1Q6SPF0 538 aaPredicted RBP8.4□□□□□ -1.07
BEST1-202ENST00000449131 CEP89Q96ST8 783 aa8.4□□□□□ -1.07
BEST1-202ENST00000449131 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.07
BEST1-202ENST00000449131 ABCF2Q9UG63 623 aa8.4□□□□□ -1.07
BEST1-202ENST00000449131 AKAP2Q9Y2D5 859 aa8.4□□□□□ -1.07
BEST1-202ENST00000449131 CDKL5O76039 1030 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 IFNL2Q8IZJ0 200 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 LRRC59Q96AG4 307 aaKnown RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 PA2G4Q9UQ80 394 aaKnown RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 ZFYVE9O95405 1425 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 TSPOAP1O95153 1857 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 NUTM2BA6NNL0 878 aaPredicted RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 NUTM2EB1AL46 878 aaPredicted RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 RAB3GAP1Q15042 981 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 SKIDA1Q1XH10 827 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 NUTM2AQ8IVF1 878 aaPredicted RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 TMOD3Q9NYL9 352 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 RAI14Q9P0K7 980 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 FLT4P35916 1363 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 SHROOM2Q13796 1616 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 SLC3A2P08195 630 aaKnown RBP8.39□□□□□ -1.07
BEST1-202ENST00000449131 FILIP1LQ4L180 1135 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 UBAC1Q9BSL1 405 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 RBSNQ9H1K0 784 aa8.39□□□□□ -1.07
BEST1-202ENST00000449131 ATP10AO60312 1499 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 TEX35Q5T0J7 233 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
BEST1-202ENST00000449131 ADCY5O95622 1261 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 GPTP24298 496 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 PIP4K2AP48426 406 aaPredicted RBP8.38□□□□□ -1.07
BEST1-202ENST00000449131 NAP1L1P55209 391 aaKnown RBP8.38□□□□□ -1.07
BEST1-202ENST00000449131 DDX46Q7L014 1031 aaKnown RBP8.38□□□□□ -1.07
BEST1-202ENST00000449131 C8orf76Q96K31 380 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 CNPY2Q9Y2B0 182 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 ANAPC15P60006 121 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
BEST1-202ENST00000449131 C16orf45Q96MC5 204 aaPredicted RBP8.38□□□□□ -1.07
BEST1-202ENST00000449131 GRM8O00222 908 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 ZSCAN22P10073 491 aaPredicted RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 TXLNAP40222 546 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 BICDL1Q6ZP65 573 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 PIBF1Q8WXW3 757 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 NEK1Q96PY6 1258 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 RBM8AQ9Y5S9 174 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 HAND2P61296 217 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 UBE2HP62256 183 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 CWF19L2Q2TBE0 894 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 MEX3CQ5U5Q3 659 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 TRMT1Q9NXH9 659 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 ALDH1L1O75891 902 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 IGHMBP2P38935 993 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 LRSAM1Q6UWE0 723 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 LRRC2Q9BYS8 371 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 CHL1O00533 1208 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 ZNF213O14771 459 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 CHMLP26374 656 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 AKAP4Q5JQC9 854 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 USP48Q86UV5 1035 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 TRERF1Q96PN7 1200 aa8.37□□□□□ -1.07
BEST1-202ENST00000449131 TRMT112Q9UI30 125 aaKnown RBP8.37□□□□□ -1.07
BEST1-202ENST00000449131 KDM5CP41229 1560 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 MSH6P52701 1360 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 RAB11FIP4Q86YS3 637 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 BRF1Q92994 677 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms