RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 CHD1LQ86WJ1 897 aa9.93□□□□□ -0.82
LINC00954-202ENST00000449086 IL16Q14005 1332 aa9.93□□□□□ -0.82
LINC00954-202ENST00000449086 HDAC1Q13547 482 aaPredicted RBP9.93□□□□□ -0.82
LINC00954-202ENST00000449086 SLC52A2Q9HAB3 445 aa9.93□□□□□ -0.82
LINC00954-202ENST00000449086 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
LINC00954-202ENST00000449086 CHAMP1Q96JM3 812 aa9.93□□□□□ -0.82
LINC00954-202ENST00000449086 PKP1Q13835 747 aa9.92□□□□□ -0.82
LINC00954-202ENST00000449086 MPRIPQ6WCQ1 1025 aa9.92□□□□□ -0.82
LINC00954-202ENST00000449086 BTAF1O14981 1849 aa9.92□□□□□ -0.82
LINC00954-202ENST00000449086 CABP4P57796 275 aa9.92□□□□□ -0.82
LINC00954-202ENST00000449086 TBC1D9Q6ZT07 1266 aa9.92□□□□□ -0.82
LINC00954-202ENST00000449086 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
LINC00954-202ENST00000449086 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
LINC00954-202ENST00000449086 NOL7Q9UMY1 257 aaKnown RBP9.92□□□□□ -0.82
LINC00954-202ENST00000449086 SYCE3A1L190 88 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 TEFQ10587 303 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 FOXD4L6Q3SYB3 417 aaPredicted RBP9.91□□□□□ -0.82
LINC00954-202ENST00000449086 FOXD4L3Q6VB84 417 aaPredicted RBP9.91□□□□□ -0.82
LINC00954-202ENST00000449086 SMARCC1Q92922 1105 aaPredicted RBP9.91□□□□□ -0.82
LINC00954-202ENST00000449086 KIF2CQ99661 725 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 KDM3BQ7LBC6 1761 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 TSC1Q92574 1164 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 LY75O60449 1722 aa9.91□□□□□ -0.82
LINC00954-202ENST00000449086 NUCB1Q02818 461 aa9.9□□□□□ -0.82
LINC00954-202ENST00000449086 JARID2Q92833 1246 aaPredicted RBP9.9□□□□□ -0.82
LINC00954-202ENST00000449086 LGR6Q9HBX8 967 aa9.9□□□□□ -0.82
LINC00954-202ENST00000449086 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
LINC00954-202ENST00000449086 ZKSCAN5Q9Y2L8 839 aa9.9□□□□□ -0.82
LINC00954-202ENST00000449086 APBB1O00213 710 aa9.9□□□□□ -0.83
LINC00954-202ENST00000449086 PLSCR1O15162 318 aa9.9□□□□□ -0.83
LINC00954-202ENST00000449086 IFT57Q9NWB7 429 aa9.9□□□□□ -0.83
LINC00954-202ENST00000449086 KIF16BQ96L93 1317 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 FAM177BA6PVY3 158 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 CSPP1Q1MSJ5 1256 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 MCM10Q7L590 875 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 PIGBQ92521 554 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 ZBTB40Q9NUA8 1239 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 ELL2O00472 640 aaPredicted RBP9.89□□□□□ -0.83
LINC00954-202ENST00000449086 BMP2KLQ5H9B9 411 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
LINC00954-202ENST00000449086 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.89□□□□□ -0.83
LINC00954-202ENST00000449086 DYNC1I1O14576 645 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
LINC00954-202ENST00000449086 ZNF853P0CG23 659 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
LINC00954-202ENST00000449086 GNAI1P63096 354 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 CBX1P83916 185 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 NFATC2IPQ8NCF5 419 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 CFAP44Q96MT7 982 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 KCPQ6ZWJ8 1503 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 ZNF500O60304 480 aaPredicted RBP9.88□□□□□ -0.83
LINC00954-202ENST00000449086 TERF1P54274 439 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 ZNF445P59923 1031 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 NUCB2P80303 420 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 SF3B2Q13435 895 aaKnown RBP9.88□□□□□ -0.83
LINC00954-202ENST00000449086 FAM182BQ5T319 152 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 ACSBG1Q96GR2 724 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 RREB1Q92766 1687 aa9.88□□□□□ -0.83
LINC00954-202ENST00000449086 TRIM37O94972 964 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 SASS6Q6UVJ0 657 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 ILDR2Q71H61 639 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 LMBRD1Q9NUN5 540 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 SOS1Q07889 1333 aaPredicted RBP9.87□□□□□ -0.83
LINC00954-202ENST00000449086 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 CHL1O00533 1208 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 KCNQ2O43526 872 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 ZGPATQ8N5A5 531 aaKnown RBP9.87□□□□□ -0.83
LINC00954-202ENST00000449086 PALLDQ8WX93 1383 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 DCTN1Q14203 1278 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 SLC27A3Q5K4L6 730 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 NOL8Q76FK4 1167 aaKnown RBP9.87□□□□□ -0.83
LINC00954-202ENST00000449086 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
LINC00954-202ENST00000449086 SMAP1Q8IYB5 467 aaPredicted RBP9.87□□□□□ -0.83
LINC00954-202ENST00000449086 ZNF830Q96NB3 372 aaPredicted RBP9.87□□□□□ -0.83
LINC00954-202ENST00000449086 CCDC39Q9UFE4 941 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 C5P01031 1676 aa9.87□□□□□ -0.83
LINC00954-202ENST00000449086 BAG6P46379 1132 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 ZNF790Q6PG37 636 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 SYTL4Q96C24 671 aaPredicted RBP9.86□□□□□ -0.83
LINC00954-202ENST00000449086 ATG3Q9NT62 314 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 HS1BP3Q53T59 392 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 TSPYL6Q8N831 410 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 GPT2Q8TD30 523 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00954-202ENST00000449086 HEG1Q9ULI3 1381 aa9.86□□□□□ -0.83
LINC00954-202ENST00000449086 CDC45O75419 566 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 TMEM63CQ9P1W3 806 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 NSFL1CQ9UNZ2 370 aaKnown RBP9.85□□□□□ -0.83
LINC00954-202ENST00000449086 LAMB4A4D0S4 1761 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 HOXB7P09629 217 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 KIAA2012Q0VF49 1180 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 TJP1Q07157 1748 aa9.85□□□□□ -0.83
LINC00954-202ENST00000449086 APBA3O96018 575 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 PDLIM2Q96JY6 352 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 FMNL2Q96PY5 1086 aa9.84□□□□□ -0.83
LINC00954-202ENST00000449086 TEX13AQ9BXU3 409 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms