RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NEFMP07197 916 aa18.18■□□□□ 0.5
PDLIM2-213ENST00000448520 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
PDLIM2-213ENST00000448520 MCM10Q7L590 875 aa18.18■□□□□ 0.5
PDLIM2-213ENST00000448520 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
PDLIM2-213ENST00000448520 C21orf2O43822 256 aa18.17■□□□□ 0.5
PDLIM2-213ENST00000448520 PRELPP51888 382 aa18.17■□□□□ 0.5
PDLIM2-213ENST00000448520 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
PDLIM2-213ENST00000448520 STYK1Q6J9G0 422 aa18.17■□□□□ 0.5
PDLIM2-213ENST00000448520 TNRC6CQ9HCJ0 1690 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-213ENST00000448520 SRGNP10124 158 aa18.16■□□□□ 0.5
PDLIM2-213ENST00000448520 MASTLQ96GX5 879 aa18.16■□□□□ 0.5
PDLIM2-213ENST00000448520 TPTE2Q6XPS3 522 aa18.15■□□□□ 0.5
PDLIM2-213ENST00000448520 CCDC24Q8N4L8 307 aa18.15■□□□□ 0.5
PDLIM2-213ENST00000448520 ANKRD31Q8N7Z5 1873 aa18.15■□□□□ 0.5
PDLIM2-213ENST00000448520 LTBP3Q9NS15 1303 aa18.15■□□□□ 0.5
PDLIM2-213ENST00000448520 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
PDLIM2-213ENST00000448520 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
PDLIM2-213ENST00000448520 ERFEQ4G0M1 354 aa18.14■□□□□ 0.49
PDLIM2-213ENST00000448520 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-213ENST00000448520 KLRG1Q96E93 195 aa18.14■□□□□ 0.49
PDLIM2-213ENST00000448520 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
PDLIM2-213ENST00000448520 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
PDLIM2-213ENST00000448520 TAOK3Q9H2K8 898 aa18.13■□□□□ 0.49
PDLIM2-213ENST00000448520 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
PDLIM2-213ENST00000448520 PIP4K2AP48426 406 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-213ENST00000448520 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
PDLIM2-213ENST00000448520 MRS2Q9HD23 443 aa18.12■□□□□ 0.49
PDLIM2-213ENST00000448520 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
PDLIM2-213ENST00000448520 DICER1Q9UPY3 1922 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 NBPF26B4DH59 902 aa18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 NPR1P16066 1061 aa18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 PRPF40BQ6NWY9 871 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 NBPF10Q6P3W6 841 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 NBPF15Q8N660 670 aa18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 NIP7Q9Y221 180 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 WDR90Q96KV7 1748 aa18.11■□□□□ 0.49
PDLIM2-213ENST00000448520 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-213ENST00000448520 HTRA3P83110 453 aa18.1■□□□□ 0.49
PDLIM2-213ENST00000448520 SLX4Q8IY92 1834 aa18.09■□□□□ 0.49
PDLIM2-213ENST00000448520 POTECB2RU33 542 aa18.09■□□□□ 0.49
PDLIM2-213ENST00000448520 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
PDLIM2-213ENST00000448520 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
PDLIM2-213ENST00000448520 C7orf43Q8WVR3 580 aa18.08■□□□□ 0.48
PDLIM2-213ENST00000448520 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.48
PDLIM2-213ENST00000448520 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
PDLIM2-213ENST00000448520 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-213ENST00000448520 ALDH1B1P30837 517 aa18.07■□□□□ 0.48
PDLIM2-213ENST00000448520 CCDC93Q567U6 631 aa18.07■□□□□ 0.48
PDLIM2-213ENST00000448520 PLEKHF1Q96S99 279 aa18.07■□□□□ 0.48
PDLIM2-213ENST00000448520 COL11A2P13942 1736 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-213ENST00000448520 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
PDLIM2-213ENST00000448520 HLFQ16534 295 aa18.06■□□□□ 0.48
PDLIM2-213ENST00000448520 NYXQ9GZU5 481 aa18.06■□□□□ 0.48
PDLIM2-213ENST00000448520 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
PDLIM2-213ENST00000448520 RTKN2Q8IZC4 609 aa18.05■□□□□ 0.48
PDLIM2-213ENST00000448520 DDNO94850 711 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-213ENST00000448520 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-213ENST00000448520 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 FAM177BA6PVY3 158 aa18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 FKBP4Q02790 459 aaKnown RBP eCLIP18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 NGEFQ8N5V2 710 aa18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 ARFGEF2Q9Y6D5 1785 aa18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 DLG5Q8TDM6 1919 aa18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
PDLIM2-213ENST00000448520 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
PDLIM2-213ENST00000448520 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.48
PDLIM2-213ENST00000448520 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
PDLIM2-213ENST00000448520 KIF6Q6ZMV9 814 aa18.02■□□□□ 0.48
PDLIM2-213ENST00000448520 CC2D2BQ6DHV5 1058 aa18.01■□□□□ 0.47
PDLIM2-213ENST00000448520 L3MBTL3Q96JM7 780 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-213ENST00000448520 CRY2Q49AN0 593 aa18■□□□□ 0.47
PDLIM2-213ENST00000448520 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
PDLIM2-213ENST00000448520 ERBB4Q15303 1308 aa17.99■□□□□ 0.47
PDLIM2-213ENST00000448520 GRIPAP1Q4V328 841 aa17.99■□□□□ 0.47
PDLIM2-213ENST00000448520 ZNF277Q9NRM2 450 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-213ENST00000448520 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
PDLIM2-213ENST00000448520 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
PDLIM2-213ENST00000448520 NUP98P52948 1817 aa17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 MYL6BP14649 208 aa17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 TTLL7Q6ZT98 887 aa17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 LDHDQ86WU2 507 aa17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 SYNE4Q8N205 404 aa17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
PDLIM2-213ENST00000448520 LAMB4A4D0S4 1761 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 IARSP41252 1262 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 GIGYF2Q6Y7W6 1299 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 PSMD1Q99460 953 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 SCN4AP35499 1836 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 PCNTO95613 3336 aa17.97■□□□□ 0.47
PDLIM2-213ENST00000448520 IBTKQ9P2D0 1353 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-213ENST00000448520 RIPK4P57078 832 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms