RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 IFNL2Q8IZJ0 200 aa8.73□□□□□ -1.01
RFC4-209ENST00000448497 STK31Q9BXU1 1019 aa8.73□□□□□ -1.01
RFC4-209ENST00000448497 MIS18AQ9NYP9 233 aa8.73□□□□□ -1.01
RFC4-209ENST00000448497 LAMB4A4D0S4 1761 aa8.73□□□□□ -1.01
RFC4-209ENST00000448497 IBTKQ9P2D0 1353 aaPredicted RBP8.73□□□□□ -1.01
RFC4-209ENST00000448497 PAPPAQ13219 1627 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 NWD2Q9ULI1 1742 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 BTBD11A6QL63 1104 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
RFC4-209ENST00000448497 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 CHRNA2Q15822 529 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 DCAF5Q96JK2 942 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 BACH2Q9BYV9 841 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 C5P01031 1676 aa8.72□□□□□ -1.01
RFC4-209ENST00000448497 MPRIPQ6WCQ1 1025 aa8.71□□□□□ -1.02
RFC4-209ENST00000448497 SLC52A2Q9HAB3 445 aa8.71□□□□□ -1.02
RFC4-209ENST00000448497 NRAPQ86VF7 1730 aa8.71□□□□□ -1.02
RFC4-209ENST00000448497 GLI3P10071 1580 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 LRP6O75581 1613 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 DPYSL4O14531 572 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 CYP27B1O15528 508 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
RFC4-209ENST00000448497 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
RFC4-209ENST00000448497 FLIIQ13045 1269 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 PDIA6Q15084 440 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 RPAP2Q8IXW5 612 aaPredicted RBP8.7□□□□□ -1.02
RFC4-209ENST00000448497 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 GCC1Q96CN9 775 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 PCDH11XQ9BZA7 1347 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 PCDH11YQ9BZA8 1340 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 ATP10DQ9P241 1426 aa8.7□□□□□ -1.02
RFC4-209ENST00000448497 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
RFC4-209ENST00000448497 IL2RBP14784 551 aa8.69□□□□□ -1.02
RFC4-209ENST00000448497 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
RFC4-209ENST00000448497 G2E3Q7L622 706 aa8.69□□□□□ -1.02
RFC4-209ENST00000448497 UPF1Q92900 1129 aaKnown RBP eCLIP8.69□□□□□ -1.02
RFC4-209ENST00000448497 PDZRN3Q9UPQ7 1066 aa8.69□□□□□ -1.02
RFC4-209ENST00000448497 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
RFC4-209ENST00000448497 NUCB1Q02818 461 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 ZNF790Q6PG37 636 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 ANKRD44Q8N8A2 993 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 ZCRB1Q8TBF4 217 aaKnown RBP8.68□□□□□ -1.02
RFC4-209ENST00000448497 DBF4Q9UBU7 674 aaPredicted RBP8.68□□□□□ -1.02
RFC4-209ENST00000448497 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 TOGARAM1Q9Y4F4 1720 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 ITGB4P16144 1822 aa8.68□□□□□ -1.02
RFC4-209ENST00000448497 KCNQ3O43525 872 aa8.67□□□□□ -1.02
RFC4-209ENST00000448497 TOM1O60784 492 aa8.67□□□□□ -1.02
RFC4-209ENST00000448497 GNAI3P08754 354 aa8.67□□□□□ -1.02
RFC4-209ENST00000448497 SIRT2Q8IXJ6 389 aa8.67□□□□□ -1.02
RFC4-209ENST00000448497 DCTPP1Q9H773 170 aa8.67□□□□□ -1.02
RFC4-209ENST00000448497 TNS2Q63HR2 1409 aa8.66□□□□□ -1.02
RFC4-209ENST00000448497 ERBB4Q15303 1308 aa8.66□□□□□ -1.02
RFC4-209ENST00000448497 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
RFC4-209ENST00000448497 EVA1CP58658 441 aa8.66□□□□□ -1.02
RFC4-209ENST00000448497 FKBP5Q13451 457 aaPredicted RBP8.66□□□□□ -1.02
RFC4-209ENST00000448497 C8orf34Q49A92 452 aa8.66□□□□□ -1.02
RFC4-209ENST00000448497 LARP1Q6PKG0 1096 aaKnown RBP8.66□□□□□ -1.02
RFC4-209ENST00000448497 DDX21Q9NR30 783 aaKnown RBP eCLIP8.66□□□□□ -1.02
RFC4-209ENST00000448497 HYPKQ9NX55 129 aa8.66□□□□□ -1.02
RFC4-209ENST00000448497 KCPQ6ZWJ8 1503 aa8.65□□□□□ -1.02
RFC4-209ENST00000448497 EVI5O60447 810 aa8.65□□□□□ -1.02
RFC4-209ENST00000448497 HMMRO75330 724 aa8.65□□□□□ -1.02
RFC4-209ENST00000448497 RGS3P49796 1198 aa8.65□□□□□ -1.02
RFC4-209ENST00000448497 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
RFC4-209ENST00000448497 CDCA7Q9BWT1 371 aaPredicted RBP8.65□□□□□ -1.02
RFC4-209ENST00000448497 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
RFC4-209ENST00000448497 ADCY9O60503 1353 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.64□□□□□ -1.03
RFC4-209ENST00000448497 F6X3S4 739 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 ALDH1L1O75891 902 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 GNAI2P04899 355 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 SNRPA1P09661 255 aaKnown RBP8.64□□□□□ -1.03
RFC4-209ENST00000448497 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 CEP85Q6P2H3 762 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 CHD1LQ86WJ1 897 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 SKAP1Q86WV1 359 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 DNAAF4Q8WXU2 420 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 FMNL2Q96PY5 1086 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 MEIS3Q99687 375 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
RFC4-209ENST00000448497 BTG4Q9NY30 223 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 CHPF2Q9P2E5 772 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 HDAC5Q9UQL6 1122 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 CICQ96RK0 1608 aaPredicted RBP8.64□□□□□ -1.03
RFC4-209ENST00000448497 SLIT2O94813 1529 aa8.64□□□□□ -1.03
RFC4-209ENST00000448497 ARFGEF2Q9Y6D5 1785 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 EIF2S2P20042 333 aaKnown RBP8.63□□□□□ -1.03
RFC4-209ENST00000448497 PTGER2P43116 358 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 CABP4P57796 275 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 BEND3Q5T5X7 828 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 KSR2Q6VAB6 950 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 TTC5Q8N0Z6 440 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 ZNF496Q96IT1 587 aaPredicted RBP8.63□□□□□ -1.03
RFC4-209ENST00000448497 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
RFC4-209ENST00000448497 USP44Q9H0E7 712 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms