RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 DACT1Q9NYF0 836 aa18.83■□□□□ 0.6
CHRD-205ENST00000448472 RPAP1Q9BWH6 1393 aaPredicted RBP18.83■□□□□ 0.6
CHRD-205ENST00000448472 HSP90AB4PQ58FF6 505 aa18.83■□□□□ 0.6
CHRD-205ENST00000448472 SPATA32Q96LK8 384 aa18.83■□□□□ 0.6
CHRD-205ENST00000448472 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.6
CHRD-205ENST00000448472 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 SSH3Q8TE77 659 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 FSD1Q9BTV5 496 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 MTMR6Q9Y217 621 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 PPFIA3O75145 1194 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 U2AF2P26368 475 aaKnown RBP eCLIP18.82■□□□□ 0.61e-7■■□□□ 11.8
CHRD-205ENST00000448472 LMOD2Q6P5Q4 547 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 CDC42BPGQ6DT37 1551 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
CHRD-205ENST00000448472 CRB1P82279 1406 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 H3BQV1 296 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 LIG1P18858 919 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 LRMPQ12912 555 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 ME3Q16798 604 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 TPD52L1Q16890 204 aaPredicted RBP18.81■□□□□ 0.6
CHRD-205ENST00000448472 ANO6Q4KMQ2 910 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 ABTB2Q8N961 1025 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 DDX11Q96FC9 970 aa18.81■□□□□ 0.6
CHRD-205ENST00000448472 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
CHRD-205ENST00000448472 TYRO3Q06418 890 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 CDC37L1Q7L3B6 337 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 ZNF710Q8N1W2 664 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 ZSCAN31Q96LW9 406 aaPredicted RBP18.8■□□□□ 0.6
CHRD-205ENST00000448472 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 BLOC1S2Q6QNY1 142 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
CHRD-205ENST00000448472 GOLGA6L19H0YKK7 550 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 AP5Z1O43299 807 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 FAM227BQ96M60 508 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 NPHP1O15259 732 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 FAM200AQ8TCP9 573 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 TTC14Q96N46 770 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 TCHHQ07283 1943 aa18.79■□□□□ 0.6
CHRD-205ENST00000448472 A0A0U1RQG5 324 aaPredicted RBP18.79■□□□□ 0.6
CHRD-205ENST00000448472 G3BP1Q13283 466 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHRD-205ENST00000448472 SH2B1Q9NRF2 756 aaPredicted RBP18.79■□□□□ 0.6
CHRD-205ENST00000448472 TPM3P06753 285 aa18.78■□□□□ 0.6
CHRD-205ENST00000448472 KIAA1524Q8TCG1 905 aa18.78■□□□□ 0.6
CHRD-205ENST00000448472 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
CHRD-205ENST00000448472 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
CHRD-205ENST00000448472 ZNF771Q7L3S4 317 aaPredicted RBP18.78■□□□□ 0.6
CHRD-205ENST00000448472 TMEM131LA2VDJ0 1609 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 TNNT1P13805 278 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 DNAJC25Q9H1X3 360 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 PRDM4Q9UKN5 801 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 DIP2CQ9Y2E4 1556 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 FLT4P35916 1363 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 BECN2A8MW95 431 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 KCNF1Q9H3M0 494 aa18.77■□□□□ 0.6
CHRD-205ENST00000448472 PDCP20941 246 aa18.77■□□□□ 0.59
CHRD-205ENST00000448472 VPS53Q5VIR6 699 aa18.77■□□□□ 0.59
CHRD-205ENST00000448472 FILIP1Q7Z7B0 1213 aa18.77■□□□□ 0.59
CHRD-205ENST00000448472 TMEM87AQ8NBN3 555 aa18.77■□□□□ 0.59
CHRD-205ENST00000448472 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.59
CHRD-205ENST00000448472 KCNQ3O43525 872 aa18.76■□□□□ 0.59
CHRD-205ENST00000448472 ZNF165P49910 485 aa18.76■□□□□ 0.59
CHRD-205ENST00000448472 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
CHRD-205ENST00000448472 RNF20Q5VTR2 975 aa18.76■□□□□ 0.59
CHRD-205ENST00000448472 PSMA5P28066 241 aa18.76■□□□□ 0.59
CHRD-205ENST00000448472 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
CHRD-205ENST00000448472 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
CHRD-205ENST00000448472 LGR6Q9HBX8 967 aa18.75■□□□□ 0.59
CHRD-205ENST00000448472 NMIQ13287 307 aaPredicted RBP18.75■□□□□ 0.59
CHRD-205ENST00000448472 AOX1Q06278 1338 aa18.75■□□□□ 0.59
CHRD-205ENST00000448472 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
CHRD-205ENST00000448472 LARP1Q6PKG0 1096 aaKnown RBP18.75■□□□□ 0.59
CHRD-205ENST00000448472 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
CHRD-205ENST00000448472 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.75■□□□□ 0.593e-6■■□□□ 13.2
CHRD-205ENST00000448472 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
CHRD-205ENST00000448472 V9GYY5 206 aaPredicted RBP18.75■□□□□ 0.59
CHRD-205ENST00000448472 CCDC112Q8NEF3 446 aa18.74■□□□□ 0.59
CHRD-205ENST00000448472 CBX8Q9HC52 389 aa18.74■□□□□ 0.59
CHRD-205ENST00000448472 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
CHRD-205ENST00000448472 LRRC2Q9BYS8 371 aa18.74■□□□□ 0.59
CHRD-205ENST00000448472 MAP3K2Q9Y2U5 619 aa18.74■□□□□ 0.59
CHRD-205ENST00000448472 NEO1Q92859 1461 aa18.74■□□□□ 0.59
CHRD-205ENST00000448472 BTBD11A6QL63 1104 aa18.73■□□□□ 0.59
CHRD-205ENST00000448472 ZRSR1Q15695 479 aaKnown RBP18.73■□□□□ 0.59
CHRD-205ENST00000448472 TRMT1Q9NXH9 659 aaKnown RBP18.73■□□□□ 0.59
CHRD-205ENST00000448472 CCDC171Q6TFL3 1326 aa18.73■□□□□ 0.59
CHRD-205ENST00000448472 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
CHRD-205ENST00000448472 AMOTL2Q9Y2J4 779 aa18.73■□□□□ 0.59
CHRD-205ENST00000448472 NAA30Q147X3 362 aaPredicted RBP18.72■□□□□ 0.59
CHRD-205ENST00000448472 EVI5LQ96CN4 794 aa18.72■□□□□ 0.59
CHRD-205ENST00000448472 SCAND2PQ9GZW5 306 aaPredicted RBP18.72■□□□□ 0.59
CHRD-205ENST00000448472 RBM33Q96EV2 1170 aaKnown RBP18.72■□□□□ 0.59
CHRD-205ENST00000448472 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
CHRD-205ENST00000448472 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms