RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CLSTN2Q9H4D0 955 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 PLCH2O75038 1416 aa11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 LARP1BQ659C4 914 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 SYTL4Q96C24 671 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.09□□□□□ -0.63
SYNPO2-204ENST00000448416 SOX12O15370 315 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 CPA1P15085 419 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 CASTP20810 708 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 OAS2P29728 719 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 EFCAB2Q5VUJ9 269 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 KIF1BO60333 1816 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 BECN2A8MW95 431 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 KIF3BO15066 747 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 MLECQ14165 292 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 BICD2Q8TD16 824 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 AK7Q96M32 723 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 TERF2IPQ9NYB0 399 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 TFIP11Q9UBB9 837 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 TET3O43151 1660 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 CAVIN2O95810 425 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 SALL3Q9BXA9 1300 aa11.08□□□□□ -0.64
SYNPO2-204ENST00000448416 HAP1P54257 671 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 SARM1Q6SZW1 724 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 SRLQ86TD4 932 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 RRP15Q9Y3B9 282 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 NPHP3Q7Z494 1330 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 FAM83GA6ND36 823 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 MNS1Q8NEH6 495 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 SLC26A8Q96RN1 970 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 SCAND2PQ9GZW5 306 aaPredicted RBP11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 NEURL4Q96JN8 1562 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 SEC31AO94979 1220 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 NOM1Q5C9Z4 860 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 RBM43Q6ZSC3 357 aaKnown RBP11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 GOLGA5Q8TBA6 731 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 NRXN1Q9ULB1 1477 aa11.07□□□□□ -0.64
SYNPO2-204ENST00000448416 NR1I2O75469 434 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 APPP05067 770 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 FBLN1P23142 703 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 HDAC5Q9UQL6 1122 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 CCDC93Q567U6 631 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 ZSCAN31Q96LW9 406 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 MYCBPQ99417 103 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 LMAN1P49257 510 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 MMP14P50281 582 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 AFAP1Q8N556 730 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 HYPKQ9NX55 129 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 KIAA0232Q92628 1395 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 ATP8B1O43520 1251 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 MAP4K4O95819 1239 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 IQCB1Q15051 598 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 BRMS1Q9HCU9 246 aa11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 SH2B1Q9NRF2 756 aaPredicted RBP11.06□□□□□ -0.64
SYNPO2-204ENST00000448416 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 GSDMDP57764 484 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 CDC37L1Q7L3B6 337 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 KCND1Q9NSA2 647 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 PDRG1Q9NUG6 133 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 GNAI2P04899 355 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 NECAB1Q8N987 351 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 CCDC34Q96HJ3 373 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 NCAPGQ9BPX3 1015 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 GUCY2CP25092 1073 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 PPP1R13BQ96KQ4 1090 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 STAP2Q9UGK3 403 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
SYNPO2-204ENST00000448416 SGSM2O43147 1006 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 E4F1Q66K89 784 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 TTC31Q49AM3 519 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 C11orf57Q6ZUT1 292 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 LEO1Q8WVC0 666 aaPredicted RBP11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 TTC21AQ8NDW8 1320 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 DNAI1Q9UI46 699 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 IFT172Q9UG01 1749 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 AATKQ6ZMQ8 1374 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 NRDCO43847 1150 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 TPM1P09493 284 aa11.04□□□□□ -0.64
SYNPO2-204ENST00000448416 PDCP20941 246 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms