RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 PES1O00541 588 aaKnown RBP12.41□□□□□ -0.42
SP4-204ENST00000448246 USP5P45974 858 aa12.41□□□□□ -0.42
SP4-204ENST00000448246 BECN2A8MW95 431 aa12.41□□□□□ -0.42
SP4-204ENST00000448246 KRT32Q14532 448 aa12.41□□□□□ -0.42
SP4-204ENST00000448246 ANKRD1Q15327 319 aa12.41□□□□□ -0.42
SP4-204ENST00000448246 UTP14AQ9BVJ6 771 aaKnown RBP12.41□□□□□ -0.42
SP4-204ENST00000448246 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
SP4-204ENST00000448246 BABAM1Q9NWV8 329 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 MYOM2P54296 1465 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 IMMTQ16891 758 aaKnown RBP12.4□□□□□ -0.42
SP4-204ENST00000448246 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
SP4-204ENST00000448246 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 NUP133Q8WUM0 1156 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 CCDC47Q96A33 483 aaKnown RBP12.4□□□□□ -0.42
SP4-204ENST00000448246 SLC52A2Q9HAB3 445 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
SP4-204ENST00000448246 JAKMIP1Q96N16 626 aaKnown RBP12.4□□□□□ -0.42
SP4-204ENST00000448246 PHAXQ9H814 394 aaKnown RBP12.4□□□□□ -0.42
SP4-204ENST00000448246 R3HCC1Q9Y3T6 440 aaKnown RBP12.4□□□□□ -0.42
SP4-204ENST00000448246 CHL1O00533 1208 aa12.4□□□□□ -0.43
SP4-204ENST00000448246 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.43
SP4-204ENST00000448246 NAPBQ9H115 298 aa12.4□□□□□ -0.43
SP4-204ENST00000448246 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 SOS1Q07889 1333 aaPredicted RBP12.39□□□□□ -0.43
SP4-204ENST00000448246 CCDC69A6NI79 296 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
SP4-204ENST00000448246 RIMBP3CA6NJZ7 1639 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 RIMBP3BA6NNM3 1639 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 RIMBP3Q9UFD9 1639 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
SP4-204ENST00000448246 KIAA2012Q0VF49 1180 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 STK3Q13188 491 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 CCDC73Q6ZRK6 1079 aa12.39□□□□□ -0.43
SP4-204ENST00000448246 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
SP4-204ENST00000448246 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 ZNF287Q9HBT7 754 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 GOLIM4O00461 696 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 A1BGP04217 495 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
SP4-204ENST00000448246 FAM135BQ49AJ0 1406 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 A2ML1A8K2U0 1454 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 LDHCP07864 332 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 HOXB7P09629 217 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 ABCA9Q8IUA7 1624 aa12.38□□□□□ -0.43
SP4-204ENST00000448246 IRS4O14654 1257 aaPredicted RBP12.37□□□□□ -0.43
SP4-204ENST00000448246 TNPO1Q92973 898 aaKnown RBP12.37□□□□□ -0.43
SP4-204ENST00000448246 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
SP4-204ENST00000448246 PARP3Q9Y6F1 533 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 POLD1P28340 1107 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
SP4-204ENST00000448246 ATP2B3Q16720 1220 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 IL15P40933 162 aaPredicted RBP12.37□□□□□ -0.43
SP4-204ENST00000448246 MAP7D2Q96T17 732 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
SP4-204ENST00000448246 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
SP4-204ENST00000448246 TRPC5Q9UL62 973 aaPredicted RBP12.36□□□□□ -0.43
SP4-204ENST00000448246 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
SP4-204ENST00000448246 BRINP3Q76B58 766 aa12.36□□□□□ -0.43
SP4-204ENST00000448246 NSFL1CQ9UNZ2 370 aaKnown RBP12.36□□□□□ -0.43
SP4-204ENST00000448246 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
SP4-204ENST00000448246 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
SP4-204ENST00000448246 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
SP4-204ENST00000448246 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
SP4-204ENST00000448246 QTRT2Q9H974 415 aaKnown RBP12.36□□□□□ -0.43
SP4-204ENST00000448246 UQCRFS1P1P0C7P4 283 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 G2E3Q7L622 706 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
SP4-204ENST00000448246 PDRG1Q9NUG6 133 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
SP4-204ENST00000448246 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
SP4-204ENST00000448246 TET3O43151 1660 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 APBA3O96018 575 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 PHKG2P15735 406 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
SP4-204ENST00000448246 PDCL3Q9H2J4 239 aa12.35□□□□□ -0.43
SP4-204ENST00000448246 USP6P35125 1406 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 RLBP1P12271 317 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 TSHZ3Q63HK5 1081 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 SDF4Q9BRK5 362 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 CARD10Q9BWT7 1032 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 SH3TC1Q8TE82 1336 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 TNNQ9UQP3 1299 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 KIF1BO60333 1816 aa12.34□□□□□ -0.43
SP4-204ENST00000448246 MPHOSPH10O00566 681 aaKnown RBP12.34□□□□□ -0.43
SP4-204ENST00000448246 BAG3O95817 575 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms