RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 KIF14Q15058 1648 aa9.31□□□□□ -0.92
USP49-205ENST00000448078 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
USP49-205ENST00000448078 RFX1P22670 979 aa9.31□□□□□ -0.92
USP49-205ENST00000448078 RNF144AP50876 292 aaPredicted RBP9.31□□□□□ -0.92
USP49-205ENST00000448078 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
USP49-205ENST00000448078 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
USP49-205ENST00000448078 KDF1Q8NAX2 398 aaPredicted RBP9.31□□□□□ -0.92
USP49-205ENST00000448078 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
USP49-205ENST00000448078 ESYT1Q9BSJ8 1104 aa9.31□□□□□ -0.92
USP49-205ENST00000448078 MKRN1Q9UHC7 482 aaKnown RBP9.31□□□□□ -0.92
USP49-205ENST00000448078 DIP2CQ9Y2E4 1556 aa9.31□□□□□ -0.92
USP49-205ENST00000448078 WASHC2CQ9Y4E1 1318 aa9.31□□□□□ -0.92
USP49-205ENST00000448078 TCOF1Q13428 1488 aaKnown RBP9.3□□□□□ -0.92
USP49-205ENST00000448078 PTSQ03393 145 aa9.3□□□□□ -0.92
USP49-205ENST00000448078 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
USP49-205ENST00000448078 ETNK1Q9HBU6 452 aa9.3□□□□□ -0.92
USP49-205ENST00000448078 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
USP49-205ENST00000448078 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
USP49-205ENST00000448078 IL2RAP01589 272 aa9.29□□□□□ -0.92
USP49-205ENST00000448078 GPC1P35052 558 aa9.29□□□□□ -0.92
USP49-205ENST00000448078 CENPCQ03188 943 aa9.29□□□□□ -0.92
USP49-205ENST00000448078 POU4F2Q12837 409 aa9.29□□□□□ -0.92
USP49-205ENST00000448078 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
USP49-205ENST00000448078 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
USP49-205ENST00000448078 A2ML1A8K2U0 1454 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 TNRQ92752 1358 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 CDC14CA4D256 554 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 BACH1O14867 736 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 WFS1O76024 890 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 RASA1P20936 1047 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 PHKA2P46019 1235 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 TPCN2Q8NHX9 752 aa9.28□□□□□ -0.92
USP49-205ENST00000448078 GAS2L1Q99501 681 aaPredicted RBP9.28□□□□□ -0.92
USP49-205ENST00000448078 DNAAF2Q9NVR5 837 aaKnown RBP9.28□□□□□ -0.92
USP49-205ENST00000448078 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
USP49-205ENST00000448078 KIF3BO15066 747 aa9.27□□□□□ -0.93
USP49-205ENST00000448078 INHAP05111 366 aa9.27□□□□□ -0.93
USP49-205ENST00000448078 TAS1R3Q7RTX0 852 aa9.27□□□□□ -0.93
USP49-205ENST00000448078 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
USP49-205ENST00000448078 PLEKHH2Q8IVE3 1493 aa9.27□□□□□ -0.93
USP49-205ENST00000448078 CCDC155Q8N6L0 562 aa9.26□□□□□ -0.93
USP49-205ENST00000448078 XAGE2Q96GT9 111 aa9.26□□□□□ -0.93
USP49-205ENST00000448078 TIMMDC1Q9NPL8 285 aa9.26□□□□□ -0.93
USP49-205ENST00000448078 EID1Q9Y6B2 187 aa9.26□□□□□ -0.93
USP49-205ENST00000448078 A2MP01023 1474 aa9.26□□□□□ -0.93
USP49-205ENST00000448078 MROH2AA6NES4 1674 aa9.26□□□□□ -0.93
USP49-205ENST00000448078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP49-205ENST00000448078 CEP170BQ9Y4F5 1589 aaPredicted RBP9.25□□□□□ -0.93
USP49-205ENST00000448078 KIAA1107Q9UPP5 1409 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 ABCA6Q8N139 1617 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 WASLO00401 505 aaPredicted RBP9.25□□□□□ -0.93
USP49-205ENST00000448078 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 CDCA8Q53HL2 280 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP49-205ENST00000448078 IRF7Q92985 503 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 VRTNQ9H8Y1 702 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 FAM135AQ9P2D6 1515 aa9.25□□□□□ -0.93
USP49-205ENST00000448078 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
USP49-205ENST00000448078 NPHP4O75161 1426 aaPredicted RBP9.24□□□□□ -0.93
USP49-205ENST00000448078 TSPY4P0CV99 314 aa9.24□□□□□ -0.93
USP49-205ENST00000448078 TSPY10P0CW01 314 aa9.24□□□□□ -0.93
USP49-205ENST00000448078 CCDC102BQ68D86 513 aa9.24□□□□□ -0.93
USP49-205ENST00000448078 AIDAQ96BJ3 306 aa9.24□□□□□ -0.93
USP49-205ENST00000448078 RGS17Q9UGC6 210 aaPredicted RBP9.24□□□□□ -0.93
USP49-205ENST00000448078 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
USP49-205ENST00000448078 CCDC18Q5T9S5 1454 aa9.23□□□□□ -0.93
USP49-205ENST00000448078 SCNN1DP51172 638 aa9.23□□□□□ -0.93
USP49-205ENST00000448078 NBPF10Q6P3W6 841 aaKnown RBP9.23□□□□□ -0.93
USP49-205ENST00000448078 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
USP49-205ENST00000448078 GRIP2Q9C0E4 1043 aa9.23□□□□□ -0.93
USP49-205ENST00000448078 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
USP49-205ENST00000448078 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
USP49-205ENST00000448078 DHX29Q7Z478 1369 aaKnown RBP9.23□□□□□ -0.93
USP49-205ENST00000448078 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
USP49-205ENST00000448078 ABCC1P33527 1531 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 PLA2G4AP47712 749 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 SMTNP53814 917 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 TREML4Q6UXN2 200 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 NPAS3Q8IXF0 933 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 RHBDD1Q8TEB9 315 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 GPAMQ9HCL2 828 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 ZNF358Q9NW07 568 aa9.22□□□□□ -0.93
USP49-205ENST00000448078 H3BM21 787 aa9.21□□□□□ -0.94
USP49-205ENST00000448078 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.94
USP49-205ENST00000448078 MEX3CQ5U5Q3 659 aaKnown RBP9.21□□□□□ -0.94
USP49-205ENST00000448078 ZNF772Q68DY9 489 aaPredicted RBP9.21□□□□□ -0.94
USP49-205ENST00000448078 PGBD3Q8N328 593 aa9.21□□□□□ -0.94
USP49-205ENST00000448078 LARGE2Q8N3Y3 721 aa9.21□□□□□ -0.94
USP49-205ENST00000448078 HINFPQ9BQA5 517 aa9.21□□□□□ -0.94
USP49-205ENST00000448078 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
USP49-205ENST00000448078 KIDINS220Q9ULH0 1771 aa9.2□□□□□ -0.94
USP49-205ENST00000448078 SLC35F4A4IF30 521 aa9.2□□□□□ -0.94
USP49-205ENST00000448078 A6NJY4 79 aa9.2□□□□□ -0.94
USP49-205ENST00000448078 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
USP49-205ENST00000448078 ITGA6P23229 1130 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms