RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CCT4P50991 539 aaKnown RBP24.73■■□□□ 1.55
SGCE-207ENST00000447873 INTS3Q68E01 1043 aaKnown RBP24.73■■□□□ 1.55
SGCE-207ENST00000447873 KIF6Q6ZMV9 814 aa24.73■■□□□ 1.55
SGCE-207ENST00000447873 PXDNLA1KZ92 1463 aa24.73■■□□□ 1.55
SGCE-207ENST00000447873 PLBD2Q8NHP8 589 aa24.72■■□□□ 1.55
SGCE-207ENST00000447873 ARFGEF2Q9Y6D5 1785 aa24.72■■□□□ 1.55
SGCE-207ENST00000447873 ERICH6BQ5W0A0 696 aa24.71■■□□□ 1.55
SGCE-207ENST00000447873 DDX19BQ9UMR2 479 aa24.71■■□□□ 1.55
SGCE-207ENST00000447873 N4BP2Q86UW6 1770 aaPredicted RBP24.71■■□□□ 1.55
SGCE-207ENST00000447873 GNPATO15228 680 aa24.71■■□□□ 1.55
SGCE-207ENST00000447873 AK7Q96M32 723 aa24.71■■□□□ 1.55
SGCE-207ENST00000447873 NUP188Q5SRE5 1749 aa24.7■■□□□ 1.54
SGCE-207ENST00000447873 ZBTB3Q9H5J0 574 aa24.7■■□□□ 1.54
SGCE-207ENST00000447873 RPS6KA4O75676 772 aa24.69■■□□□ 1.54
SGCE-207ENST00000447873 BAG6P46379 1132 aa24.69■■□□□ 1.54
SGCE-207ENST00000447873 EN1Q05925 392 aaPredicted RBP24.69■■□□□ 1.54
SGCE-207ENST00000447873 DZIP3Q86Y13 1208 aaKnown RBP24.69■■□□□ 1.54
SGCE-207ENST00000447873 RTCBQ9Y3I0 505 aaKnown RBP24.69■■□□□ 1.54
SGCE-207ENST00000447873 COL15A1P39059 1388 aa24.69■■□□□ 1.54
SGCE-207ENST00000447873 NEXNQ0ZGT2 675 aa24.68■■□□□ 1.54
SGCE-207ENST00000447873 CCDC125Q86Z20 511 aa24.68■■□□□ 1.54
SGCE-207ENST00000447873 METTL22Q9BUU2 404 aaPredicted RBP24.68■■□□□ 1.54
SGCE-207ENST00000447873 SRCIN1Q9C0H9 1055 aa24.68■■□□□ 1.54
SGCE-207ENST00000447873 MAP3K15Q6ZN16 1313 aa24.68■■□□□ 1.54
SGCE-207ENST00000447873 ATP10DQ9P241 1426 aa24.68■■□□□ 1.54
SGCE-207ENST00000447873 A0A087WZG4 1122 aa24.67■■□□□ 1.54
SGCE-207ENST00000447873 BEND3Q5T5X7 828 aa24.67■■□□□ 1.54
SGCE-207ENST00000447873 CAMKK2Q96RR4 588 aa24.67■■□□□ 1.54
SGCE-207ENST00000447873 CHMP4BQ9H444 224 aaKnown RBP24.67■■□□□ 1.54
SGCE-207ENST00000447873 TBC1D2BQ9UPU7 963 aa24.67■■□□□ 1.54
SGCE-207ENST00000447873 EZH2Q15910 746 aaKnown RBP24.67■■□□□ 1.54
SGCE-207ENST00000447873 MYD88Q99836 296 aa24.66■■□□□ 1.54
SGCE-207ENST00000447873 LINS1Q8NG48 757 aa24.65■■□□□ 1.54
SGCE-207ENST00000447873 ERVV-1B6SEH8 477 aa24.64■■□□□ 1.54
SGCE-207ENST00000447873 ZBTB7BO15156 539 aaPredicted RBP24.64■■□□□ 1.54
SGCE-207ENST00000447873 UBR3Q6ZT12 1888 aa24.64■■□□□ 1.53
SGCE-207ENST00000447873 NUP98P52948 1817 aa24.64■■□□□ 1.53
SGCE-207ENST00000447873 ALDH1L1O75891 902 aa24.63■■□□□ 1.53
SGCE-207ENST00000447873 AAMPQ13685 434 aa24.63■■□□□ 1.53
SGCE-207ENST00000447873 DEFB132Q7Z7B7 95 aa24.63■■□□□ 1.53
SGCE-207ENST00000447873 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
SGCE-207ENST00000447873 CWF19L2Q2TBE0 894 aaKnown RBP24.63■■□□□ 1.53
SGCE-207ENST00000447873 TRAPPC3LQ5T215 181 aa24.63■■□□□ 1.53
SGCE-207ENST00000447873 GIGYF2Q6Y7W6 1299 aaKnown RBP24.63■■□□□ 1.53
SGCE-207ENST00000447873 SMIM5Q71RC9 77 aa24.62■■□□□ 1.53
SGCE-207ENST00000447873 PHF14O94880 888 aa24.61■■□□□ 1.53
SGCE-207ENST00000447873 IGKV5-2P06315 115 aa24.61■■□□□ 1.53
SGCE-207ENST00000447873 TCIRG1Q13488 830 aa24.61■■□□□ 1.53
SGCE-207ENST00000447873 HLFQ16534 295 aa24.61■■□□□ 1.53
SGCE-207ENST00000447873 HSP90AB3PQ58FF7 597 aa24.61■■□□□ 1.53
SGCE-207ENST00000447873 ATP5J2-PTCD1G3V325 749 aa24.6■■□□□ 1.53
SGCE-207ENST00000447873 CAMTA2O94983 1202 aa24.6■■□□□ 1.53
SGCE-207ENST00000447873 ADRA2BP18089 450 aa24.6■■□□□ 1.53
SGCE-207ENST00000447873 AMIGO3Q86WK7 504 aa24.6■■□□□ 1.53
SGCE-207ENST00000447873 ZBTB40Q9NUA8 1239 aa24.6■■□□□ 1.53
SGCE-207ENST00000447873 BCORQ6W2J9 1755 aa24.6■■□□□ 1.53
SGCE-207ENST00000447873 NEURL1BA8MQ27 555 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 SSFA2P28290 1259 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 ARHGEF1Q92888 912 aaKnown RBP24.59■■□□□ 1.53
SGCE-207ENST00000447873 TFCP2L1Q9NZI6 479 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 ANKRD36CQ5JPF3 1778 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 C4AP0C0L4 1744 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.59■■□□□ 1.53
SGCE-207ENST00000447873 ZPR1O75312 459 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 RFC4P35249 363 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 ZNF827Q17R98 1081 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 AKT1S1Q96B36 256 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 MEIS3Q99687 375 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 PPP4R2Q9NY27 417 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 NARFQ9UHQ1 456 aa24.59■■□□□ 1.53
SGCE-207ENST00000447873 USP44Q9H0E7 712 aa24.58■■□□□ 1.52
SGCE-207ENST00000447873 C9orf78Q9NZ63 289 aaPredicted RBP24.58■■□□□ 1.52
SGCE-207ENST00000447873 ZNF652Q9Y2D9 606 aa24.58■■□□□ 1.52
SGCE-207ENST00000447873 GNAI3P08754 354 aa24.57■■□□□ 1.52
SGCE-207ENST00000447873 SCN7AQ01118 1682 aa24.57■■□□□ 1.52
SGCE-207ENST00000447873 IBTKQ9P2D0 1353 aaPredicted RBP24.56■■□□□ 1.52
SGCE-207ENST00000447873 GCKRQ14397 625 aa24.56■■□□□ 1.52
SGCE-207ENST00000447873 ISCA1Q9BUE6 129 aa24.56■■□□□ 1.52
SGCE-207ENST00000447873 USPL1Q5W0Q7 1092 aa24.55■■□□□ 1.52
SGCE-207ENST00000447873 CLEC4GQ6UXB4 293 aa24.55■■□□□ 1.52
SGCE-207ENST00000447873 CCDC191Q8NCU4 936 aa24.55■■□□□ 1.52
SGCE-207ENST00000447873 CWC25Q9NXE8 425 aaPredicted RBP24.55■■□□□ 1.52
SGCE-207ENST00000447873 GRM8O00222 908 aa24.54■■□□□ 1.52
SGCE-207ENST00000447873 RGL2O15211 777 aa24.54■■□□□ 1.52
SGCE-207ENST00000447873 TRIM28Q13263 835 aaKnown RBP24.54■■□□□ 1.52
SGCE-207ENST00000447873 SRP68Q9UHB9 627 aaKnown RBP24.54■■□□□ 1.52
SGCE-207ENST00000447873 TUBGCP6Q96RT7 1819 aa24.54■■□□□ 1.52
SGCE-207ENST00000447873 USP42Q9H9J4 1324 aaKnown RBP24.54■■□□□ 1.52
SGCE-207ENST00000447873 UBTFL1P0CB47 393 aaPredicted RBP24.54■■□□□ 1.52
SGCE-207ENST00000447873 GPTP24298 496 aa24.54■■□□□ 1.52
SGCE-207ENST00000447873 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
SGCE-207ENST00000447873 STK32BQ9NY57 414 aa24.54■■□□□ 1.52
SGCE-207ENST00000447873 NBPF7P0C2Y1 421 aaPredicted RBP24.53■■□□□ 1.52
SGCE-207ENST00000447873 CCDC136Q96JN2 1154 aa24.53■■□□□ 1.52
SGCE-207ENST00000447873 C1orf115Q9H7X2 142 aa24.53■■□□□ 1.52
SGCE-207ENST00000447873 GNAI2P04899 355 aa24.52■■□□□ 1.52
SGCE-207ENST00000447873 ZNF34Q8IZ26 560 aa24.52■■□□□ 1.52
SGCE-207ENST00000447873 FLAD1Q8NFF5 587 aa24.52■■□□□ 1.52
SGCE-207ENST00000447873 SLC15A2Q16348 729 aa24.51■■□□□ 1.51
SGCE-207ENST00000447873 UTYO14607 1347 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms